Analysis of interatomic Contacts of Structural Units in PDB entry:
9GKK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9GKK entry

There are 3 chains in PDB entry 9GKK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 57ARG 565
B
 SER 57ARG 565
C
 ALA 56VAL 569
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 9GKK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 80Right-handed alpha
Helix 2
AA2
A
80 120Right-handed alpha
Helix 3
AA3
A
121 124Right-handed 310
Helix 4
AA4
A
137 150Right-handed alpha
Helix 5
AA5
A
156 169Right-handed alpha
Helix 6
AA6
A
177 190Right-handed alpha
Helix 7
AA7
A
191 209Right-handed alpha
Helix 8
AA8
A
217 220Right-handed 310
Helix 9
AA9
A
221 232Right-handed alpha
Helix 10
AB1
A
232 268Right-handed alpha
Helix 11
AB2
A
275 289Right-handed alpha
Helix 12
AB3
A
300 324Right-handed alpha
Helix 13
AB4
A
325 348Right-handed alpha
Helix 14
AB5
A
359 366Right-handed alpha
Helix 15
AB6
A
366 388Right-handed alpha
Helix 16
AB7
A
393 401Right-handed alpha
Helix 17
AB8
A
402 427Right-handed alpha
Helix 18
AB9
A
435 437Right-handed 310
Helix 19
AC1
A
438 445Right-handed alpha
Helix 20
AC2
A
449 451Right-handed 310
Helix 21
AC3
A
452 481Right-handed alpha
Helix 22
AC4
A
488 509Right-handed alpha
Helix 23
AC5
A
515 546Right-handed alpha
Helix 24
AC6
A
547 565Right-handed alpha
Helix 25
AC7
B
62 80Right-handed alpha
Helix 26
AC8
B
82 120Right-handed alpha
Helix 27
AC9
B
121 125Right-handed 310
Helix 28
AD1
B
137 150Right-handed alpha
Helix 29
AD2
B
156 169Right-handed alpha
Helix 30
AD3
B
177 190Right-handed alpha
Helix 31
AD4
B
191 209Right-handed alpha
Helix 32
AD5
B
218 220Right-handed 310
Helix 33
AD6
B
221 231Right-handed alpha
Helix 34
AD7
B
232 268Right-handed alpha
Helix 35
AD8
B
275 289Right-handed alpha
Helix 36
AD9
B
300 324Right-handed alpha
Helix 37
AE1
B
325 343Right-handed alpha
Helix 38
AE2
B
359 366Right-handed alpha
Helix 39
AE3
B
366 388Right-handed alpha
Helix 40
AE4
B
393 427Right-handed alpha
Helix 41
AE5
B
438 446Right-handed alpha
Helix 42
AE6
B
451 481Right-handed alpha
Helix 43
AE7
B
488 509Right-handed alpha
Helix 44
AE8
B
515 546Right-handed alpha
Helix 45
AE9
B
547 563Right-handed alpha
Helix 46
AF1
C
63 80Right-handed alpha
Helix 47
AF2
C
80 119Right-handed alpha
Helix 48
AF3
C
120 125Right-handed 310
Helix 49
AF4
C
137 147Right-handed alpha
Helix 50
AF5
C
152 169Right-handed alpha
Helix 51
AF6
C
177 190Right-handed alpha
Helix 52
AF7
C
191 209Right-handed alpha
Helix 53
AF8
C
217 220Right-handed 310
Helix 54
AF9
C
221 232Right-handed alpha
Helix 55
AG1
C
232 268Right-handed alpha
Helix 56
AG2
C
275 294Right-handed alpha
Helix 57
AG3
C
303 324Right-handed alpha
Helix 58
AG4
C
325 343Right-handed alpha
Helix 59
AG5
C
343 349Right-handed alpha
Helix 60
AG6
C
359 366Right-handed alpha
Helix 61
AG7
C
366 377Right-handed alpha
Helix 62
AG8
C
377 388Right-handed alpha
Helix 63
AG9
C
393 427Right-handed alpha
Helix 64
AH1
C
438 446Right-handed alpha
Helix 65
AH2
C
449 480Right-handed alpha
Helix 66
AH3
C
488 511Right-handed alpha
Helix 67
AH4
C
513 546Right-handed alpha
Helix 68
AH5
C
547 560Right-handed alpha
Helix 69
AH6
C
561 569Right-handed alpha
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There are no sheets in PDB entry 9GKK
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