Analysis of interatomic Contacts of Structural Units in PDB entry:
9GL3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9GL3 entry

There are 2 chains in PDB entry 9GL3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ILE 2GLN 565
A
 ALA 316TYR 890
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 9GL3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
2 7Right-handed alpha
Helix 2
AA2
B
13 37Right-handed alpha
Helix 3
AA3
B
37 47Right-handed alpha
Helix 4
AA4
B
49 52Right-handed 310
Helix 5
AA5
B
53 97Right-handed alpha
Helix 6
AA6
B
98 100Right-handed 310
Helix 7
AA7
B
101 105Right-handed 310
Helix 8
AA8
B
106 119Right-handed alpha
Helix 9
AA9
B
121 126Right-handed alpha
Helix 10
AB1
B
126 131Right-handed alpha
Helix 11
AB2
B
131 153Right-handed alpha
Helix 12
AB3
B
153 178Right-handed alpha
Helix 13
AB4
B
178 202Right-handed alpha
Helix 14
AB5
B
202 209Right-handed alpha
Helix 15
AB6
B
217 237Right-handed alpha
Helix 16
AB7
B
237 265Right-handed alpha
Helix 17
AB8
B
269 293Right-handed alpha
Helix 18
AB9
B
293 312Right-handed alpha
Helix 19
AC1
B
369 378Right-handed alpha
Helix 20
AC2
B
396 398Right-handed 310
Helix 21
AC3
B
399 405Right-handed alpha
Helix 22
AC4
B
420 427Right-handed alpha
Helix 23
AC5
B
433 444Right-handed alpha
Helix 24
AC6
B
446 453Right-handed alpha
Helix 25
AC7
B
455 459Right-handed 310
Helix 26
AC8
B
469 484Right-handed alpha
Helix 27
AC9
B
499 512Right-handed alpha
Helix 28
AD1
B
525 530Right-handed 310
Helix 29
AD2
B
548 556Right-handed alpha
Helix 30
AD3
B
557 563Right-handed alpha
Helix 31
AD4
A
317 323Right-handed alpha
Helix 32
AD5
A
326 361Right-handed alpha
Helix 33
AD6
A
363 412Right-handed alpha
Helix 34
AD7
A
416 423Right-handed alpha
Helix 35
AD8
A
423 432Right-handed alpha
Helix 36
AD9
A
432 438Right-handed alpha
Helix 37
AE1
A
438 444Right-handed alpha
Helix 38
AE2
A
444 467Right-handed alpha
Helix 39
AE3
A
467 473Right-handed alpha
Helix 40
AE4
A
474 516Right-handed alpha
Helix 41
AE5
A
516 523Right-handed alpha
Helix 42
AE6
A
529 561Right-handed alpha
Helix 43
AE7
A
561 579Right-handed alpha
Helix 44
AE8
A
583 586Right-handed 310
Helix 45
AE9
A
587 593Right-handed alpha
Helix 46
AF1
A
597 606Right-handed alpha
Helix 47
AF2
A
607 625Right-handed alpha
Helix 48
AF3
A
692 702Right-handed alpha
Helix 49
AF4
A
722 728Right-handed alpha
Helix 50
AF5
A
743 749Right-handed alpha
Helix 51
AF6
A
756 767Right-handed alpha
Helix 52
AF7
A
769 776Right-handed alpha
Helix 53
AF8
A
778 782Right-handed 310
Helix 54
AF9
A
791 807Right-handed alpha
Helix 55
AG1
A
821 836Right-handed alpha
Helix 56
AG2
A
847 852Right-handed alpha
Helix 57
AG3
A
870 878Right-handed alpha
Helix 58
AG4
A
879 890Right-handed alpha
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There are 4 sheets in PDB entry 9GL3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
344 354first strand
Strand 2
B
332 341anti-parallel
Strand 3
B
385 390anti-parallel
Strand 4
B
393 394anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
407 410first strand
Strand 2
B
488 491parallel
Strand 3
B
518 522parallel
Strand 4
B
359 363parallel
Strand 5
B
534 538parallel
Strand 6
B
543 547anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
668 673first strand
Strand 2
A
654 662anti-parallel
Strand 3
A
708 713anti-parallel
Strand 4
A
716 717anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
730 733first strand
Strand 2
A
810 814parallel
Strand 3
A
840 844parallel
Strand 4
A
682 686parallel
Strand 5
A
856 861parallel
Strand 6
A
864 869anti-parallel
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