Analysis of interatomic Contacts of Structural Units in PDB entry:
9GO9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9GO9 entry

There are 4 chains in PDB entry 9GO9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 21	GLY 1195
B	GLU 21	GLY 1195
C	GLU 21	GLY 1195
D	GLU 21	GLY 1195

There are254 helices in PDB entry 9GO9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	29	36	Right-handed alpha
Helix 2	AA2	A	36	49	Right-handed alpha
Helix 3	AA3	A	49	54	Right-handed alpha
Helix 4	AA4	A	56	65	Right-handed alpha
Helix 5	AA5	A	66	79	Right-handed alpha
Helix 6	AA6	A	83	90	Right-handed alpha
Helix 7	AA7	A	95	116	Right-handed alpha
Helix 8	AA8	A	118	151	Right-handed alpha
Helix 9	AA9	A	158	181	Right-handed alpha
Helix 10	AB1	A	183	192	Right-handed alpha
Helix 11	AB2	A	196	203	Right-handed alpha
Helix 12	AB3	A	212	223	Right-handed alpha
Helix 13	AB4	A	232	271	Right-handed alpha
Helix 14	AB5	A	272	295	Right-handed alpha
Helix 15	AB6	A	305	319	Right-handed alpha
Helix 16	AB7	A	326	350	Right-handed alpha
Helix 17	AB8	A	454	463	Right-handed alpha
Helix 18	AB9	A	466	480	Right-handed alpha
Helix 19	AC1	A	493	502	Right-handed alpha
Helix 20	AC2	A	503	512	Right-handed alpha
Helix 21	AC3	A	515	520	Right-handed alpha
Helix 22	AC4	A	528	536	Right-handed alpha
Helix 23	AC5	A	538	549	Right-handed alpha
Helix 24	AC6	A	562	571	Right-handed alpha
Helix 25	AC7	A	572	580	Right-handed alpha
Helix 26	AC8	A	596	605	Right-handed alpha
Helix 27	AC9	A	605	615	Right-handed alpha
Helix 28	AD1	A	629	637	Right-handed alpha
Helix 29	AD2	A	639	649	Right-handed alpha
Helix 30	AD3	A	663	672	Right-handed alpha
Helix 31	AD4	A	673	682	Right-handed alpha
Helix 32	AD5	A	698	707	Right-handed alpha
Helix 33	AD6	A	708	717	Right-handed alpha
Helix 34	AD7	A	732	740	Right-handed alpha
Helix 35	AD8	A	742	753	Right-handed alpha
Helix 36	AD9	A	765	773	Right-handed alpha
Helix 37	AE1	A	777	786	Right-handed alpha
Helix 38	AE2	A	798	807	Right-handed alpha
Helix 39	AE3	A	808	817	Right-handed alpha
Helix 40	AE4	A	831	840	Right-handed alpha
Helix 41	AE5	A	841	852	Right-handed alpha
Helix 42	AE6	A	865	874	Right-handed alpha
Helix 43	AE7	A	875	886	Right-handed alpha
Helix 44	AE8	A	898	907	Right-handed alpha
Helix 45	AE9	A	908	917	Right-handed alpha
Helix 46	AF1	A	931	940	Right-handed alpha
Helix 47	AF2	A	941	948	Right-handed alpha
Helix 48	AF3	A	949	952	Right-handed 310
Helix 49	AF4	A	975	986	Right-handed alpha
Helix 50	AF5	A	988	999	Right-handed alpha
Helix 51	AF6	A	1006	1015	Right-handed alpha
Helix 52	AF7	A	1016	1028	Right-handed alpha
Helix 53	AF8	A	1038	1047	Right-handed alpha
Helix 54	AF9	A	1048	1058	Right-handed alpha
Helix 55	AG1	A	1066	1070	Right-handed 310
Helix 56	AG2	A	1071	1080	Right-handed alpha
Helix 57	AG3	A	1081	1091	Right-handed alpha
Helix 58	AG4	A	1104	1112	Right-handed alpha
Helix 59	AG5	A	1116	1125	Right-handed alpha
Helix 60	AG6	A	1140	1149	Right-handed alpha
Helix 61	AG7	A	1150	1161	Right-handed alpha
Helix 62	AG8	A	1173	1181	Right-handed alpha
Helix 63	AG9	A	1186	1194	Right-handed alpha
Helix 64	AH1	B	26	34	Right-handed alpha
Helix 65	AH2	B	36	49	Right-handed alpha
Helix 66	AH3	B	49	54	Right-handed alpha
Helix 67	AH4	B	56	65	Right-handed alpha
Helix 68	AH5	B	66	79	Right-handed alpha
Helix 69	AH6	B	83	90	Right-handed alpha
Helix 70	AH7	B	95	115	Right-handed alpha
Helix 71	AH8	B	118	151	Right-handed alpha
Helix 72	AH9	B	158	181	Right-handed alpha
Helix 73	AI1	B	183	192	Right-handed alpha
Helix 74	AI2	B	196	203	Right-handed alpha
Helix 75	AI3	B	212	222	Right-handed alpha
Helix 76	AI4	B	233	271	Right-handed alpha
Helix 77	AI5	B	272	295	Right-handed alpha
Helix 78	AI6	B	305	320	Right-handed alpha
Helix 79	AI7	B	321	323	Right-handed 310
Helix 80	AI8	B	328	350	Right-handed alpha
Helix 81	AI9	B	457	463	Right-handed alpha
Helix 82	AJ1	B	467	480	Right-handed alpha
Helix 83	AJ2	B	493	502	Right-handed alpha
Helix 84	AJ3	B	503	513	Right-handed alpha
Helix 85	AJ4	B	515	520	Right-handed alpha
Helix 86	AJ5	B	528	536	Right-handed alpha
Helix 87	AJ6	B	539	549	Right-handed alpha
Helix 88	AJ7	B	562	571	Right-handed alpha
Helix 89	AJ8	B	572	582	Right-handed alpha
Helix 90	AJ9	B	596	601	Right-handed alpha
Helix 91	AK1	B	606	615	Right-handed alpha
Helix 92	AK2	B	629	637	Right-handed alpha
Helix 93	AK3	B	639	648	Right-handed alpha
Helix 94	AK4	B	663	672	Right-handed alpha
Helix 95	AK5	B	673	682	Right-handed alpha
Helix 96	AK6	B	698	705	Right-handed alpha
Helix 97	AK7	B	708	718	Right-handed alpha
Helix 98	AK8	B	732	741	Right-handed alpha
Helix 99	AK9	B	742	753	Right-handed alpha
Helix 100	AL1	B	765	773	Right-handed alpha
Helix 101	AL2	B	776	784	Right-handed alpha
Helix 102	AL3	B	798	807	Right-handed alpha
Helix 103	AL4	B	809	817	Right-handed alpha
Helix 104	AL5	B	831	838	Right-handed alpha
Helix 105	AL6	B	841	852	Right-handed alpha
Helix 106	AL7	B	865	874	Right-handed alpha
Helix 107	AL8	B	875	877	Right-handed 310
Helix 108	AL9	B	878	886	Right-handed alpha
Helix 109	AM1	B	898	904	Right-handed alpha
Helix 110	AM2	B	909	915	Right-handed alpha
Helix 111	AM3	B	916	919	Right-handed 310
Helix 112	AM4	B	932	940	Right-handed alpha
Helix 113	AM5	B	941	948	Right-handed alpha
Helix 114	AM6	B	949	954	Right-handed 310
Helix 115	AM7	B	974	986	Right-handed alpha
Helix 116	AM8	B	988	999	Right-handed alpha
Helix 117	AM9	B	1001	1005	Right-handed 310
Helix 118	AN1	B	1006	1015	Right-handed alpha
Helix 119	AN2	B	1016	1027	Right-handed alpha
Helix 120	AN3	B	1038	1046	Right-handed alpha
Helix 121	AN4	B	1049	1058	Right-handed alpha
Helix 122	AN5	B	1071	1080	Right-handed alpha
Helix 123	AN6	B	1081	1092	Right-handed alpha
Helix 124	AN7	B	1104	1112	Right-handed alpha
Helix 125	AN8	B	1115	1125	Right-handed alpha
Helix 126	AN9	B	1140	1148	Right-handed alpha
Helix 127	AO1	B	1152	1160	Right-handed alpha
Helix 128	AO2	B	1173	1181	Right-handed alpha
Helix 129	AO3	B	1183	1191	Right-handed alpha
Helix 130	AO4	C	26	36	Right-handed alpha
Helix 131	AO5	C	36	47	Right-handed alpha
Helix 132	AO6	C	49	54	Right-handed alpha
Helix 133	AO7	C	56	64	Right-handed alpha
Helix 134	AO8	C	66	79	Right-handed alpha
Helix 135	AO9	C	83	90	Right-handed alpha
Helix 136	AP1	C	95	113	Right-handed alpha
Helix 137	AP2	C	118	152	Right-handed alpha
Helix 138	AP3	C	158	181	Right-handed alpha
Helix 139	AP4	C	183	192	Right-handed alpha
Helix 140	AP5	C	196	204	Right-handed alpha
Helix 141	AP6	C	212	223	Right-handed alpha
Helix 142	AP7	C	234	271	Right-handed alpha
Helix 143	AP8	C	272	293	Right-handed alpha
Helix 144	AP9	C	305	320	Right-handed alpha
Helix 145	AQ1	C	328	350	Right-handed alpha
Helix 146	AQ2	C	454	463	Right-handed alpha
Helix 147	AQ3	C	467	479	Right-handed alpha
Helix 148	AQ4	C	493	502	Right-handed alpha
Helix 149	AQ5	C	503	511	Right-handed alpha
Helix 150	AQ6	C	512	514	Right-handed 310
Helix 151	AQ7	C	515	520	Right-handed alpha
Helix 152	AQ8	C	528	536	Right-handed alpha
Helix 153	AQ9	C	539	549	Right-handed alpha
Helix 154	AR1	C	562	571	Right-handed alpha
Helix 155	AR2	C	572	580	Right-handed alpha
Helix 156	AR3	C	596	605	Right-handed alpha
Helix 157	AR4	C	605	614	Right-handed alpha
Helix 158	AR5	C	629	637	Right-handed alpha
Helix 159	AR6	C	639	648	Right-handed alpha
Helix 160	AR7	C	663	672	Right-handed alpha
Helix 161	AR8	C	673	683	Right-handed alpha
Helix 162	AR9	C	698	706	Right-handed alpha
Helix 163	AS1	C	708	717	Right-handed alpha
Helix 164	AS2	C	732	741	Right-handed alpha
Helix 165	AS3	C	742	753	Right-handed alpha
Helix 166	AS4	C	765	772	Right-handed alpha
Helix 167	AS5	C	777	784	Right-handed alpha
Helix 168	AS6	C	808	817	Right-handed alpha
Helix 169	AS7	C	835	840	Right-handed alpha
Helix 170	AS8	C	841	852	Right-handed alpha
Helix 171	AS9	C	865	872	Right-handed alpha
Helix 172	AT1	C	876	883	Right-handed alpha
Helix 173	AT2	C	898	903	Right-handed alpha
Helix 174	AT3	C	904	906	Right-handed 310
Helix 175	AT4	C	909	916	Right-handed alpha
Helix 176	AT5	C	931	940	Right-handed alpha
Helix 177	AT6	C	941	949	Right-handed alpha
Helix 178	AT7	C	975	986	Right-handed alpha
Helix 179	AT8	C	988	998	Right-handed alpha
Helix 180	AT9	C	1006	1015	Right-handed alpha
Helix 181	AU1	C	1017	1026	Right-handed alpha
Helix 182	AU2	C	1038	1045	Right-handed alpha
Helix 183	AU3	C	1048	1059	Right-handed alpha
Helix 184	AU4	C	1071	1080	Right-handed alpha
Helix 185	AU5	C	1083	1089	Right-handed alpha
Helix 186	AU6	C	1104	1112	Right-handed alpha
Helix 187	AU7	C	1114	1124	Right-handed alpha
Helix 188	AU8	C	1140	1148	Right-handed alpha
Helix 189	AU9	C	1153	1160	Right-handed alpha
Helix 190	AV1	C	1175	1182	Right-handed alpha
Helix 191	AV2	C	1183	1191	Right-handed alpha
Helix 192	AV3	D	28	30	Right-handed 310
Helix 193	AV4	D	31	36	Right-handed alpha
Helix 194	AV5	D	36	49	Right-handed alpha
Helix 195	AV6	D	49	54	Right-handed alpha
Helix 196	AV7	D	56	79	Right-handed alpha
Helix 197	AV8	D	83	89	Right-handed alpha
Helix 198	AV9	D	95	116	Right-handed alpha
Helix 199	AW1	D	118	151	Right-handed alpha
Helix 200	AW2	D	158	181	Right-handed alpha
Helix 201	AW3	D	183	193	Right-handed alpha
Helix 202	AW4	D	196	203	Right-handed alpha
Helix 203	AW5	D	212	223	Right-handed alpha
Helix 204	AW6	D	234	271	Right-handed alpha
Helix 205	AW7	D	272	296	Right-handed alpha
Helix 206	AW8	D	305	320	Right-handed alpha
Helix 207	AW9	D	329	350	Right-handed alpha
Helix 208	AX1	D	456	463	Right-handed alpha
Helix 209	AX2	D	467	480	Right-handed alpha
Helix 210	AX3	D	493	502	Right-handed alpha
Helix 211	AX4	D	504	513	Right-handed alpha
Helix 212	AX5	D	515	520	Right-handed alpha
Helix 213	AX6	D	528	536	Right-handed alpha
Helix 214	AX7	D	539	549	Right-handed alpha
Helix 215	AX8	D	562	570	Right-handed alpha
Helix 216	AX9	D	572	582	Right-handed alpha
Helix 217	AY1	D	596	605	Right-handed alpha
Helix 218	AY2	D	605	614	Right-handed alpha
Helix 219	AY3	D	629	637	Right-handed alpha
Helix 220	AY4	D	639	648	Right-handed alpha
Helix 221	AY5	D	663	672	Right-handed alpha
Helix 222	AY6	D	673	682	Right-handed alpha
Helix 223	AY7	D	698	705	Right-handed alpha
Helix 224	AY8	D	708	718	Right-handed alpha
Helix 225	AY9	D	727	731	Right-handed 310
Helix 226	AZ1	D	732	741	Right-handed alpha
Helix 227	AZ2	D	742	753	Right-handed alpha
Helix 228	AZ3	D	765	773	Right-handed alpha
Helix 229	AZ4	D	776	785	Right-handed alpha
Helix 230	AZ5	D	798	807	Right-handed alpha
Helix 231	AZ6	D	808	817	Right-handed alpha
Helix 232	AZ7	D	831	840	Right-handed alpha
Helix 233	AZ8	D	841	852	Right-handed alpha
Helix 234	AZ9	D	865	873	Right-handed alpha
Helix 235	BA1	D	878	886	Right-handed alpha
Helix 236	BA2	D	898	907	Right-handed alpha
Helix 237	BA3	D	911	917	Right-handed alpha
Helix 238	BA4	D	934	940	Right-handed alpha
Helix 239	BA5	D	941	951	Right-handed alpha
Helix 240	BA6	D	962	966	Right-handed 310
Helix 241	BA7	D	975	986	Right-handed alpha
Helix 242	BA8	D	988	998	Right-handed alpha
Helix 243	BA9	D	1006	1015	Right-handed alpha
Helix 244	BB1	D	1017	1023	Right-handed alpha
Helix 245	BB2	D	1038	1047	Right-handed alpha
Helix 246	BB3	D	1048	1058	Right-handed alpha
Helix 247	BB4	D	1071	1080	Right-handed alpha
Helix 248	BB5	D	1084	1091	Right-handed alpha
Helix 249	BB6	D	1104	1112	Right-handed alpha
Helix 250	BB7	D	1117	1125	Right-handed alpha
Helix 251	BB8	D	1140	1149	Right-handed alpha
Helix 252	BB9	D	1151	1159	Right-handed alpha
Helix 253	BC1	D	1176	1182	Right-handed alpha
Helix 254	BC2	D	1183	1191	Right-handed alpha

There are 11 sheets in PDB entry 9GO9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	364	366	first strand
Strand 2	A	415	417	anti-parallel
Strand 3	A	450	452	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	406	407	first strand
Strand 2	A	383	390	anti-parallel
Strand 3	A	427	433	anti-parallel
Strand 4	A	439	444	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	364	366	first strand
Strand 2	B	415	417	anti-parallel
Strand 3	B	451	452	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	406	407	first strand
Strand 2	B	383	390	anti-parallel
Strand 3	B	427	433	anti-parallel
Strand 4	B	439	444	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	355	first strand
Strand 2	C	396	397	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	364	366	first strand
Strand 2	C	415	417	anti-parallel
Strand 3	C	450	452	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	406	407	first strand
Strand 2	C	383	390	anti-parallel
Strand 3	C	427	433	anti-parallel
Strand 4	C	439	444	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	960	961	first strand
Strand 2	C	973	974	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	354	355	first strand
Strand 2	D	396	397	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	364	366	first strand
Strand 2	D	415	417	anti-parallel
Strand 3	D	451	452	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	406	407	first strand
Strand 2	D	383	390	anti-parallel
Strand 3	D	427	433	anti-parallel
Strand 4	D	439	444	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9GO9

Analysis of interatomic Contacts of Structural Units in PDB entry:
9GO9