Analysis of interatomic Contacts of Structural Units in PDB entry:
9GQN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9GQN entry

There are 2 chains in PDB entry 9GQN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 129LEU 558
B
 PHE 129LEU 558
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 9GQN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
139 149Right-handed alpha
Helix 2
AA2
A
151 155Right-handed 310
Helix 3
AA3
A
178 198Right-handed alpha
Helix 4
AA4
A
207 222Right-handed alpha
Helix 5
AA5
A
226 240Right-handed alpha
Helix 6
AA6
A
250 273Right-handed alpha
Helix 7
AA7
A
277 286Right-handed alpha
Helix 8
AA8
A
287 314Right-handed alpha
Helix 9
AA9
A
315 319Right-handed 310
Helix 10
AB1
A
320 324Right-handed 310
Helix 11
AB2
A
327 329Right-handed 310
Helix 12
AB3
A
330 344Right-handed alpha
Helix 13
AB4
A
344 362Right-handed alpha
Helix 14
AB5
A
376 388Right-handed alpha
Helix 15
AB6
A
400 416Right-handed alpha
Helix 16
AB7
A
420 438Right-handed alpha
Helix 17
AB8
A
453 478Right-handed alpha
Helix 18
AB9
A
495 499Right-handed 310
Helix 19
AC1
A
507 525Right-handed alpha
Helix 20
AC2
A
537 556Right-handed alpha
Helix 21
AC3
B
139 149Right-handed alpha
Helix 22
AC4
B
151 155Right-handed 310
Helix 23
AC5
B
178 198Right-handed alpha
Helix 24
AC6
B
207 222Right-handed alpha
Helix 25
AC7
B
226 240Right-handed alpha
Helix 26
AC8
B
250 273Right-handed alpha
Helix 27
AC9
B
277 286Right-handed alpha
Helix 28
AD1
B
287 314Right-handed alpha
Helix 29
AD2
B
315 319Right-handed 310
Helix 30
AD3
B
320 324Right-handed 310
Helix 31
AD4
B
327 329Right-handed 310
Helix 32
AD5
B
330 344Right-handed alpha
Helix 33
AD6
B
344 362Right-handed alpha
Helix 34
AD7
B
376 388Right-handed alpha
Helix 35
AD8
B
400 416Right-handed alpha
Helix 36
AD9
B
420 438Right-handed alpha
Helix 37
AE1
B
453 478Right-handed alpha
Helix 38
AE2
B
495 499Right-handed 310
Helix 39
AE3
B
507 525Right-handed alpha
Helix 40
AE4
B
537 556Right-handed alpha
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There are no sheets in PDB entry 9GQN
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