Analysis of interatomic Contacts of Structural Units in PDB entry:
9GSQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9GSQ entry

There are 2 chains in PDB entry 9GSQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 86ILE 282
B
 GLN 86GLU 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 9GSQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
112 117Right-handed alpha
Helix 2
AA2
A
118 126Right-handed alpha
Helix 3
AA3
A
135 166Right-handed alpha
Helix 4
AA4
A
179 199Right-handed alpha
Helix 5
AA5
A
207 213Right-handed alpha
Helix 6
AA6
A
214 224Right-handed alpha
Helix 7
AA7
A
231 246Right-handed alpha
Helix 8
AA8
A
262 276Right-handed alpha
Helix 9
AA9
B
112 118Right-handed alpha
Helix 10
AB1
B
118 126Right-handed alpha
Helix 11
AB2
B
135 166Right-handed alpha
Helix 12
AB3
B
179 199Right-handed alpha
Helix 13
AB4
B
207 213Right-handed alpha
Helix 14
AB5
B
214 224Right-handed alpha
Helix 15
AB6
B
231 247Right-handed alpha
Helix 16
AB7
B
262 277Right-handed alpha
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There are no sheets in PDB entry 9GSQ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il