Analysis of interatomic Contacts of Structural Units in PDB entry:
9GTZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9GTZ entry

There are 2 chains in PDB entry 9GTZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 2LYS 333
B
 ILE 6PRO 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 9GTZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 14Right-handed 310
Helix 2
AA2
A
23 38Right-handed alpha
Helix 3
AA3
A
40 64Right-handed alpha
Helix 4
AA4
A
79 84Right-handed alpha
Helix 5
AA5
A
104 123Right-handed alpha
Helix 6
AA6
A
153 159Right-handed alpha
Helix 7
AA7
A
167 188Right-handed alpha
Helix 8
AA8
A
190 207Right-handed alpha
Helix 9
AA9
A
208 211Right-handed 310
Helix 10
AB1
A
214 228Right-handed alpha
Helix 11
AB2
A
236 250Right-handed alpha
Helix 12
AB3
A
270 275Right-handed 310
Helix 13
AB4
A
276 296Right-handed alpha
Helix 14
AB5
A
298 303Right-handed alpha
Helix 15
AB6
A
309 314Right-handed 310
Helix 16
AB7
B
7 20Right-handed alpha
Helix 17
AB8
B
24 49Right-handed alpha
Helix 18
AB9
B
128 133Right-handed alpha
Helix 19
AC1
B
153 172Right-handed alpha
Helix 20
AC2
B
205 212Right-handed alpha
Helix 21
AC3
B
231 251Right-handed alpha
Helix 22
AC4
B
257 272Right-handed alpha
Helix 23
AC5
B
273 279Right-handed 310
Helix 24
AC6
B
280 294Right-handed alpha
Helix 25
AC7
B
299 313Right-handed alpha
Helix 26
AC8
B
339 340Right-handed alpha
Helix 27
AC9
B
356 373Right-handed alpha
Helix 28
AD1
B
375 380Right-handed alpha
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There are 3 sheets in PDB entry 9GTZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 78first strand
Strand 2
A
92 99anti-parallel
Strand 3
A
145 152parallel
Strand 4
A
136 140anti-parallel
Strand 5
A
129 133anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 319first strand
Strand 2
A
322 324anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 127first strand
Strand 2
B
141 147anti-parallel
Strand 3
B
198 204parallel
Strand 4
B
186 189anti-parallel
Strand 5
B
178 181anti-parallel
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