Analysis of interatomic Contacts of Structural Units in PDB entry:
9GWJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9GWJ entry

There are 4 chains in PDB entry 9GWJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLU 203
B
 MSE 17LEU 212
C
 THR 2GLU 203
D
 MSE 17LEU 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 9GWJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 55Right-handed alpha
Helix 2
AA2
A
61 66Right-handed 310
Helix 3
AA3
A
68 116Right-handed alpha
Helix 4
AA4
A
121 127Right-handed alpha
Helix 5
AA5
A
134 163Right-handed alpha
Helix 6
AA6
A
173 185Right-handed alpha
Helix 7
AA7
A
189 197Right-handed alpha
Helix 8
AA8
A
197 202Right-handed alpha
Helix 9
AA9
B
18 67Right-handed alpha
Helix 10
AB1
B
75 127Right-handed alpha
Helix 11
AB2
B
141 173Right-handed alpha
Helix 12
AB3
B
175 189Right-handed alpha
Helix 13
AB4
B
195 205Right-handed alpha
Helix 14
AB5
C
7 55Right-handed alpha
Helix 15
AB6
C
60 64Right-handed 310
Helix 16
AB7
C
68 116Right-handed alpha
Helix 17
AB8
C
121 127Right-handed alpha
Helix 18
AB9
C
134 160Right-handed alpha
Helix 19
AC1
C
161 166Right-handed 310
Helix 20
AC2
C
170 172Right-handed 310
Helix 21
AC3
C
173 185Right-handed alpha
Helix 22
AC4
C
189 197Right-handed alpha
Helix 23
AC5
C
197 202Right-handed alpha
Helix 24
AC6
D
18 68Right-handed alpha
Helix 25
AC7
D
72 127Right-handed alpha
Helix 26
AC8
D
143 173Right-handed alpha
Helix 27
AC9
D
175 188Right-handed alpha
Helix 28
AD1
D
195 205Right-handed alpha
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There are no sheets in PDB entry 9GWJ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il