Analysis of interatomic Contacts of Structural Units in PDB entry:
9GZ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9GZ2 entry

There is 1 chain in PDB entry 9GZ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3LEU 796
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9GZ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 16Right-handed 310
Helix 2
AA2
A
19 27Right-handed alpha
Helix 3
AA3
A
81 85Right-handed 310
Helix 4
AA4
A
89 93Right-handed 310
Helix 5
AA5
A
97 110Right-handed alpha
Helix 6
AA6
A
135 143Right-handed alpha
Helix 7
AA7
A
153 169Right-handed alpha
Helix 8
AA8
A
183 202Right-handed alpha
Helix 9
AA9
A
215 231Right-handed alpha
Helix 10
AB1
A
269 274Right-handed 310
Helix 11
AB2
A
283 292Right-handed alpha
Helix 12
AB3
A
294 301Right-handed alpha
Helix 13
AB4
A
306 309Right-handed 310
Helix 14
AB5
A
310 315Right-handed alpha
Helix 15
AB6
A
324 339Right-handed alpha
Helix 16
AB7
A
342 360Right-handed alpha
Helix 17
AB8
A
378 388Right-handed alpha
Helix 18
AB9
A
391 401Right-handed alpha
Helix 19
AC1
A
416 444Right-handed alpha
Helix 20
AC2
A
472 495Right-handed alpha
Helix 21
AC3
A
495 504Right-handed alpha
Helix 22
AC4
A
517 526Right-handed alpha
Helix 23
AC5
A
529 538Right-handed alpha
Helix 24
AC6
A
544 557Right-handed alpha
Helix 25
AC7
A
592 599Right-handed alpha
Helix 26
AC8
A
602 611Right-handed alpha
Helix 27
AC9
A
614 621Right-handed alpha
Helix 28
AD1
A
646 664Right-handed alpha
Helix 29
AD2
A
685 696Right-handed alpha
Helix 30
AD3
A
697 708Right-handed alpha
Helix 31
AD4
A
715 723Right-handed alpha
Helix 32
AD5
A
724 726Right-handed 310
Helix 33
AD6
A
737 749Right-handed alpha
Helix 34
AD7
A
768 795Right-handed alpha
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There are 7 sheets in PDB entry 9GZ2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
58 63anti-parallel
Strand 3
A
46 55anti-parallel
Strand 4
A
36 40anti-parallel
Strand 5
A
77 78anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 117first strand
Strand 2
A
122 125anti-parallel
Strand 3
A
666 673parallel
Strand 4
A
172 177parallel
Strand 5
A
455 461parallel
Strand 6
A
246 252anti-parallel
Strand 7
A
258 265anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
A
241 242anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 366first strand
Strand 2
A
373 377anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 406first strand
Strand 2
A
409 412anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
563 564first strand
Strand 2
A
577 581anti-parallel
Strand 3
A
584 588anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
711 714first strand
Strand 2
A
762 765anti-parallel
Strand 3
A
756 758anti-parallel
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