Analysis of interatomic Contacts of Structural Units in PDB entry:
9GZ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9GZ3 entry

There is 1 chain in PDB entry 9GZ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3LEU 796
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 9GZ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 16Right-handed 310
Helix 2
AA2
A
21 26Right-handed alpha
Helix 3
AA3
A
27 29Right-handed 310
Helix 4
AA4
A
81 85Right-handed 310
Helix 5
AA5
A
89 93Right-handed 310
Helix 6
AA6
A
97 110Right-handed alpha
Helix 7
AA7
A
131 134Right-handed 310
Helix 8
AA8
A
135 143Right-handed alpha
Helix 9
AA9
A
153 169Right-handed alpha
Helix 10
AB1
A
183 202Right-handed alpha
Helix 11
AB2
A
215 232Right-handed alpha
Helix 12
AB3
A
270 274Right-handed 310
Helix 13
AB4
A
283 292Right-handed alpha
Helix 14
AB5
A
294 299Right-handed alpha
Helix 15
AB6
A
306 310Right-handed 310
Helix 16
AB7
A
324 339Right-handed alpha
Helix 17
AB8
A
342 360Right-handed alpha
Helix 18
AB9
A
378 388Right-handed alpha
Helix 19
AC1
A
391 401Right-handed alpha
Helix 20
AC2
A
416 448Right-handed alpha
Helix 21
AC3
A
472 495Right-handed alpha
Helix 22
AC4
A
495 504Right-handed alpha
Helix 23
AC5
A
517 525Right-handed alpha
Helix 24
AC6
A
529 537Right-handed alpha
Helix 25
AC7
A
544 557Right-handed alpha
Helix 26
AC8
A
592 597Right-handed alpha
Helix 27
AC9
A
602 610Right-handed alpha
Helix 28
AD1
A
614 621Right-handed alpha
Helix 29
AD2
A
646 662Right-handed alpha
Helix 30
AD3
A
663 665Right-handed 310
Helix 31
AD4
A
685 696Right-handed alpha
Helix 32
AD5
A
697 708Right-handed alpha
Helix 33
AD6
A
715 723Right-handed alpha
Helix 34
AD7
A
737 748Right-handed alpha
Helix 35
AD8
A
768 796Right-handed alpha
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There are 6 sheets in PDB entry 9GZ3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
58 63anti-parallel
Strand 3
A
46 55anti-parallel
Strand 4
A
36 40anti-parallel
Strand 5
A
77 78anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 117first strand
Strand 2
A
122 125anti-parallel
Strand 3
A
666 673parallel
Strand 4
A
172 177parallel
Strand 5
A
455 461parallel
Strand 6
A
244 252anti-parallel
Strand 7
A
258 268anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 366first strand
Strand 2
A
373 375anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 406first strand
Strand 2
A
409 412anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
563 564first strand
Strand 2
A
578 581anti-parallel
Strand 3
A
584 586anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
711 714first strand
Strand 2
A
762 765anti-parallel
Strand 3
A
756 758anti-parallel
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