Analysis of interatomic Contacts of Structural Units in PDB entry:
9GZY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9GZY entry

There are 24 chains in PDB entry 9GZY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 15TYR 37
B
 PHE 15TYR 37
C
 LEU 16SER 29
D
 LEU 16SER 29
E
 PHE 15TYR 37
F
 PHE 15TYR 37
G
 LEU 16SER 29
H
 LEU 16SER 29
I
 PHE 15TYR 37
J
 PHE 15TYR 37
K
 LEU 16SER 29
L
 LEU 16SER 29
M
 PHE 15TYR 37
N
 PHE 15TYR 37
O
 LEU 16SER 29
P
 LEU 16SER 29
Q
 PHE 15TYR 37
R
 PHE 15TYR 37
S
 LEU 16SER 29
T
 LEU 16SER 29
U
 PHE 15TYR 37
V
 PHE 15TYR 37
W
 LEU 16SER 29
X
 LEU 16SER 29
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9GZY

There are 8 sheets in PDB entry 9GZY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 22first strand
Strand 2
E
16 22parallel
Strand 3
I
16 22parallel
Strand 4
M
16 22parallel
Strand 5
Q
16 22parallel
Strand 6
U
16 22parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 33first strand
Strand 2
E
26 33parallel
Strand 3
I
26 33parallel
Strand 4
M
26 33parallel
Strand 5
Q
26 33parallel
Strand 6
U
26 33parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 22first strand
Strand 2
F
16 22parallel
Strand 3
J
16 22parallel
Strand 4
N
16 22parallel
Strand 5
R
16 22parallel
Strand 6
V
16 22parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 33first strand
Strand 2
F
26 33parallel
Strand 3
J
26 33parallel
Strand 4
N
26 33parallel
Strand 5
R
26 33parallel
Strand 6
V
26 33parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 22first strand
Strand 2
G
17 22parallel
Strand 3
K
17 22parallel
Strand 4
O
17 22parallel
Strand 5
S
17 22parallel
Strand 6
W
17 22parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
25 28first strand
Strand 2
G
25 28parallel
Strand 3
K
25 28parallel
Strand 4
O
25 28parallel
Strand 5
S
25 28parallel
Strand 6
W
26 28parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
17 22first strand
Strand 2
H
17 22parallel
Strand 3
L
17 22parallel
Strand 4
P
17 22parallel
Strand 5
T
17 22parallel
Strand 6
X
17 22parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
25 28first strand
Strand 2
H
25 28parallel
Strand 3
L
25 28parallel
Strand 4
P
25 28parallel
Strand 5
T
25 28parallel
Strand 6
X
25 28parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il