Analysis of interatomic Contacts of Structural Units in PDB entry:
9H03

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9H03 entry

There are 2 chains in PDB entry 9H03 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLU 1283
B	MET 1	GLU 1283

There are 81 helices in PDB entry 9H03. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	37	53	Right-handed alpha
Helix 2	AA2	A	55	59	Right-handed 310
Helix 3	AA3	A	67	75	Right-handed alpha
Helix 4	AA4	A	110	115	Right-handed alpha
Helix 5	AA5	A	119	121	Right-handed 310
Helix 6	AA6	A	142	157	Right-handed alpha
Helix 7	AA7	A	172	186	Right-handed alpha
Helix 8	AA8	A	194	198	Right-handed alpha
Helix 9	AA9	A	202	235	Right-handed alpha
Helix 10	AB1	A	252	258	Right-handed alpha
Helix 11	AB2	A	259	263	Right-handed 310
Helix 12	AB3	A	266	282	Right-handed alpha
Helix 13	AB4	A	360	364	Right-handed 310
Helix 14	AB5	A	371	380	Right-handed alpha
Helix 15	AB6	A	396	400	Right-handed 310
Helix 16	AB7	A	404	409	Right-handed alpha
Helix 17	AB8	A	416	437	Right-handed alpha
Helix 18	AB9	A	460	469	Right-handed alpha
Helix 19	AC1	A	478	480	Right-handed 310
Helix 20	AC2	A	481	490	Right-handed alpha
Helix 21	AC3	A	510	529	Right-handed alpha
Helix 22	AC4	A	533	535	Right-handed 310
Helix 23	AC5	A	564	581	Right-handed alpha
Helix 24	AC6	A	618	622	Right-handed 310
Helix 25	AC7	A	700	727	Right-handed alpha
Helix 26	AC8	A	729	734	Right-handed alpha
Helix 27	AC9	A	756	760	Right-handed 310
Helix 28	AD1	A	762	775	Right-handed alpha
Helix 29	AD2	A	788	792	Right-handed 310
Helix 30	AD3	A	837	842	Right-handed 310
Helix 31	AD4	A	857	866	Right-handed alpha
Helix 32	AD5	A	870	899	Right-handed alpha
Helix 33	AD6	A	900	924	Right-handed alpha
Helix 34	AD7	A	984	998	Right-handed alpha
Helix 35	AD8	A	1010	1015	Right-handed alpha
Helix 36	AD9	A	1038	1053	Right-handed alpha
Helix 37	AE1	A	1118	1126	Right-handed alpha
Helix 38	AE2	A	1228	1232	Right-handed 310
Helix 39	AE3	A	1233	1244	Right-handed alpha
Helix 40	AE4	A	1248	1254	Right-handed alpha
Helix 41	AE5	A	1272	1277	Right-handed alpha
Helix 42	AE6	A	1278	1281	Right-handed 310
Helix 43	AE7	B	37	53	Right-handed alpha
Helix 44	AE8	B	55	59	Right-handed 310
Helix 45	AE9	B	67	75	Right-handed alpha
Helix 46	AF1	B	110	115	Right-handed alpha
Helix 47	AF2	B	142	157	Right-handed alpha
Helix 48	AF3	B	172	186	Right-handed alpha
Helix 49	AF4	B	194	198	Right-handed alpha
Helix 50	AF5	B	202	235	Right-handed alpha
Helix 51	AF6	B	252	258	Right-handed alpha
Helix 52	AF7	B	259	263	Right-handed 310
Helix 53	AF8	B	265	282	Right-handed alpha
Helix 54	AF9	B	360	364	Right-handed 310
Helix 55	AG1	B	371	380	Right-handed alpha
Helix 56	AG2	B	397	409	Right-handed alpha
Helix 57	AG3	B	414	437	Right-handed alpha
Helix 58	AG4	B	460	469	Right-handed alpha
Helix 59	AG5	B	478	480	Right-handed 310
Helix 60	AG6	B	481	490	Right-handed alpha
Helix 61	AG7	B	510	529	Right-handed alpha
Helix 62	AG8	B	564	581	Right-handed alpha
Helix 63	AG9	B	646	650	Right-handed 310
Helix 64	AH1	B	700	727	Right-handed alpha
Helix 65	AH2	B	729	734	Right-handed alpha
Helix 66	AH3	B	756	760	Right-handed 310
Helix 67	AH4	B	762	775	Right-handed alpha
Helix 68	AH5	B	788	792	Right-handed 310
Helix 69	AH6	B	837	842	Right-handed 310
Helix 70	AH7	B	857	866	Right-handed alpha
Helix 71	AH8	B	870	899	Right-handed alpha
Helix 72	AH9	B	900	924	Right-handed alpha
Helix 73	AI1	B	984	998	Right-handed alpha
Helix 74	AI2	B	1010	1015	Right-handed alpha
Helix 75	AI3	B	1038	1054	Right-handed alpha
Helix 76	AI4	B	1118	1126	Right-handed alpha
Helix 77	AI5	B	1228	1232	Right-handed 310
Helix 78	AI6	B	1233	1244	Right-handed alpha
Helix 79	AI7	B	1248	1254	Right-handed alpha
Helix 80	AI8	B	1272	1277	Right-handed alpha
Helix 81	AI9	B	1278	1281	Right-handed 310

There are 28 sheets in PDB entry 9H03. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	31	first strand
Strand 2	A	12	19	anti-parallel
Strand 3	A	2	8	anti-parallel
Strand 4	A	61	65	parallel
Strand 5	A	241	243	parallel
Strand 6	A	249	251	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	126	first strand
Strand 2	A	81	86	parallel
Strand 3	A	160	164	parallel
Strand 4	A	190	193	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	131	first strand
Strand 2	A	136	139	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	329	331	first strand
Strand 2	A	296	301	anti-parallel
Strand 3	A	286	291	anti-parallel
Strand 4	A	449	451	parallel
Strand 5	A	472	475	parallel
Strand 6	A	685	688	anti-parallel
Strand 7	A	677	679	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	315	316	first strand
Strand 2	A	319	320	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	341	first strand
Strand 2	A	347	349	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	495	503	first strand
Strand 2	A	592	603	anti-parallel
Strand 3	A	537	547	anti-parallel
Strand 4	A	554	558	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	626	633	first strand
Strand 2	A	636	645	anti-parallel
Strand 3	A	660	663	parallel
Strand 4	A	668	670	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	749	752	first strand
Strand 2	A	738	743	anti-parallel
Strand 3	A	810	820	anti-parallel
Strand 4	A	798	807	anti-parallel
Strand 5	A	783	786	anti-parallel
Strand 6	A	848	852	anti-parallel
Strand 7	A	855	856	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	929	931	first strand
Strand 2	A	954	958	anti-parallel
Strand 3	A	961	965	anti-parallel
Strand 4	A	1017	1020	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	936	938	first strand
Strand 2	A	949	951	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1083	1091	first strand
Strand 2	A	1070	1078	anti-parallel
Strand 3	A	1161	1166	anti-parallel
Strand 4	A	1205	1210	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1128	1135	first strand
Strand 2	A	1151	1157	anti-parallel
Strand 3	A	1215	1219	anti-parallel
Strand 4	A	1188	1191	anti-parallel
Strand 5	A	1199	1201	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1259	1262	first strand
Strand 2	A	1265	1268	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	31	first strand
Strand 2	B	12	19	anti-parallel
Strand 3	B	2	8	anti-parallel
Strand 4	B	61	65	parallel
Strand 5	B	241	243	parallel
Strand 6	B	249	251	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	126	first strand
Strand 2	B	81	86	parallel
Strand 3	B	160	164	parallel
Strand 4	B	190	193	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	131	first strand
Strand 2	B	136	139	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	329	331	first strand
Strand 2	B	296	301	anti-parallel
Strand 3	B	286	291	anti-parallel
Strand 4	B	449	451	parallel
Strand 5	B	473	475	parallel
Strand 6	B	685	687	anti-parallel
Strand 7	B	677	679	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	315	316	first strand
Strand 2	B	319	320	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	341	first strand
Strand 2	B	347	349	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	492	503	first strand
Strand 2	B	592	603	anti-parallel
Strand 3	B	537	547	anti-parallel
Strand 4	B	554	558	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	626	633	first strand
Strand 2	B	636	644	anti-parallel
Strand 3	B	660	661	parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	749	752	first strand
Strand 2	B	738	743	anti-parallel
Strand 3	B	811	820	anti-parallel
Strand 4	B	798	806	anti-parallel
Strand 5	B	783	786	anti-parallel
Strand 6	B	848	852	anti-parallel
Strand 7	B	855	856	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	929	931	first strand
Strand 2	B	954	958	anti-parallel
Strand 3	B	961	965	anti-parallel
Strand 4	B	1017	1020	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	936	938	first strand
Strand 2	B	949	951	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1083	1091	first strand
Strand 2	B	1070	1078	anti-parallel
Strand 3	B	1162	1166	anti-parallel
Strand 4	B	1205	1209	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1128	1135	first strand
Strand 2	B	1151	1157	anti-parallel
Strand 3	B	1215	1219	anti-parallel
Strand 4	B	1188	1191	anti-parallel
Strand 5	B	1199	1201	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1259	1262	first strand
Strand 2	B	1265	1268	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9H03

Analysis of interatomic Contacts of Structural Units in PDB entry:
9H03