Analysis of interatomic Contacts of Structural Units in PDB entry:
9H0B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9H0B entry

There are 4 chains in PDB entry 9H0B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ASP 17	SER 384
A	ASP 327	THR 603
C	ASP 17	SER 384
D	ASP 327	THR 603

There are 55 helices in PDB entry 9H0B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	17	28	Right-handed alpha
Helix 2	AA2	B	38	48	Right-handed alpha
Helix 3	AA3	B	67	74	Right-handed alpha
Helix 4	AA4	B	86	90	Right-handed 310
Helix 5	AA5	B	93	112	Right-handed alpha
Helix 6	AA6	B	121	131	Right-handed alpha
Helix 7	AA7	B	143	147	Right-handed 310
Helix 8	AA8	B	149	159	Right-handed alpha
Helix 9	AA9	B	177	183	Right-handed 310
Helix 10	AB1	B	193	207	Right-handed alpha
Helix 11	AB2	B	216	227	Right-handed alpha
Helix 12	AB3	B	249	260	Right-handed alpha
Helix 13	AB4	B	268	273	Right-handed alpha
Helix 14	AB5	B	279	295	Right-handed alpha
Helix 15	AB6	B	317	319	Right-handed 310
Helix 16	AB7	B	320	331	Right-handed alpha
Helix 17	AB8	B	334	343	Right-handed alpha
Helix 18	AB9	B	343	357	Right-handed alpha
Helix 19	AC1	B	369	373	Right-handed 310
Helix 20	AC2	A	332	338	Right-handed alpha
Helix 21	AC3	A	345	348	Right-handed 310
Helix 22	AC4	A	359	367	Right-handed alpha
Helix 23	AC5	A	378	382	Right-handed 310
Helix 24	AC6	A	398	406	Right-handed 310
Helix 25	AC7	A	411	417	Right-handed alpha
Helix 26	AC8	A	436	438	Right-handed 310
Helix 27	AC9	A	446	452	Right-handed alpha
Helix 28	AD1	A	530	534	Right-handed 310
Helix 29	AD2	C	18	28	Right-handed alpha
Helix 30	AD3	C	38	48	Right-handed alpha
Helix 31	AD4	C	67	74	Right-handed alpha
Helix 32	AD5	C	86	90	Right-handed 310
Helix 33	AD6	C	93	112	Right-handed alpha
Helix 34	AD7	C	121	131	Right-handed alpha
Helix 35	AD8	C	143	147	Right-handed 310
Helix 36	AD9	C	149	159	Right-handed alpha
Helix 37	AE1	C	177	183	Right-handed 310
Helix 38	AE2	C	193	207	Right-handed alpha
Helix 39	AE3	C	216	227	Right-handed alpha
Helix 40	AE4	C	249	260	Right-handed alpha
Helix 41	AE5	C	268	273	Right-handed alpha
Helix 42	AE6	C	279	295	Right-handed alpha
Helix 43	AE7	C	317	319	Right-handed 310
Helix 44	AE8	C	320	331	Right-handed alpha
Helix 45	AE9	C	334	343	Right-handed alpha
Helix 46	AF1	C	343	357	Right-handed alpha
Helix 47	AF2	C	369	373	Right-handed 310
Helix 48	AF3	D	332	338	Right-handed alpha
Helix 49	AF4	D	359	367	Right-handed alpha
Helix 50	AF5	D	378	382	Right-handed 310
Helix 51	AF6	D	398	406	Right-handed 310
Helix 52	AF7	D	411	417	Right-handed alpha
Helix 53	AF8	D	436	438	Right-handed 310
Helix 54	AF9	D	446	452	Right-handed alpha
Helix 55	AG1	D	530	534	Right-handed 310

There are 20 sheets in PDB entry 9H0B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	37	first strand
Strand 2	B	76	82	parallel
Strand 3	B	134	141	parallel
Strand 4	B	116	118	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	37	first strand
Strand 2	B	76	82	parallel
Strand 3	B	134	141	parallel
Strand 4	B	161	165	parallel
Strand 5	B	209	211	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	233	first strand
Strand 2	B	262	265	parallel
Strand 3	B	299	301	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	343	first strand
Strand 2	A	439	441	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	349	353	first strand
Strand 2	A	386	396	anti-parallel
Strand 3	A	583	595	anti-parallel
Strand 4	A	426	434	anti-parallel
Strand 5	A	369	375	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	358	first strand
Strand 2	A	600	602	parallel
Strand 3	A	386	396	anti-parallel
Strand 4	A	583	595	anti-parallel
Strand 5	A	579	580	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	466	470	first strand
Strand 2	A	573	577	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	475	first strand
Strand 2	A	538	540	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	552	553	first strand
Strand 2	A	570	571	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	558	559	first strand
Strand 2	A	564	565	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	37	first strand
Strand 2	C	76	82	parallel
Strand 3	C	134	141	parallel
Strand 4	C	116	118	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	37	first strand
Strand 2	C	76	82	parallel
Strand 3	C	134	141	parallel
Strand 4	C	161	165	parallel
Strand 5	C	209	211	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	233	first strand
Strand 2	C	262	265	parallel
Strand 3	C	299	301	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	341	342	first strand
Strand 2	D	439	440	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	349	353	first strand
Strand 2	D	386	396	anti-parallel
Strand 3	D	583	595	anti-parallel
Strand 4	D	425	434	anti-parallel
Strand 5	D	369	375	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	356	358	first strand
Strand 2	D	600	602	parallel
Strand 3	D	386	396	anti-parallel
Strand 4	D	583	595	anti-parallel
Strand 5	D	579	580	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	466	470	first strand
Strand 2	D	573	577	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	473	475	first strand
Strand 2	D	538	540	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	552	553	first strand
Strand 2	D	570	571	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	558	559	first strand
Strand 2	D	564	565	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9H0B

Analysis of interatomic Contacts of Structural Units in PDB entry:
9H0B