Analysis of interatomic Contacts of Structural Units in PDB entry:
9H0K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H0K entry

There are 2 chains in PDB entry 9H0K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1323GLN 1697
B
 HIS 1320GLN 1697
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9H0K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1325 1329Right-handed 310
Helix 2
AA2
A
1332 1350Right-handed alpha
Helix 3
AA3
A
1372 1380Right-handed alpha
Helix 4
AA4
A
1442 1444Right-handed 310
Helix 5
AA5
A
1445 1465Right-handed alpha
Helix 6
AA6
A
1495 1513Right-handed alpha
Helix 7
AA7
A
1522 1529Right-handed alpha
Helix 8
AA8
A
1533 1537Right-handed 310
Helix 9
AA9
A
1544 1556Right-handed alpha
Helix 10
AB1
A
1616 1627Right-handed alpha
Helix 11
AB2
A
1639 1644Right-handed 310
Helix 12
AB3
A
1663 1673Right-handed alpha
Helix 13
AB4
A
1679 1696Right-handed alpha
Helix 14
AB5
B
1325 1329Right-handed 310
Helix 15
AB6
B
1332 1350Right-handed alpha
Helix 16
AB7
B
1372 1380Right-handed alpha
Helix 17
AB8
B
1442 1444Right-handed 310
Helix 18
AB9
B
1445 1465Right-handed alpha
Helix 19
AC1
B
1495 1513Right-handed alpha
Helix 20
AC2
B
1522 1529Right-handed alpha
Helix 21
AC3
B
1533 1537Right-handed 310
Helix 22
AC4
B
1544 1556Right-handed alpha
Helix 23
AC5
B
1616 1627Right-handed alpha
Helix 24
AC6
B
1639 1645Right-handed 310
Helix 25
AC7
B
1657 1661Right-handed 310
Helix 26
AC8
B
1663 1674Right-handed alpha
Helix 27
AC9
B
1679 1696Right-handed alpha
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There are 2 sheets in PDB entry 9H0K. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1357 1370first strand
Strand 2
A
1388 1402anti-parallel
Strand 3
A
1405 1417anti-parallel
Strand 4
A
1428 1436anti-parallel
Strand 5
A
1468 1472parallel
Strand 6
A
1631 1635anti-parallel
Strand 7
A
1518 1521anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1357 1370first strand
Strand 2
B
1388 1402anti-parallel
Strand 3
B
1405 1417anti-parallel
Strand 4
B
1428 1436anti-parallel
Strand 5
B
1468 1472parallel
Strand 6
B
1631 1635anti-parallel
Strand 7
B
1518 1521anti-parallel
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