Analysis of interatomic Contacts of Structural Units in PDB entry:
9H1O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9H1O entry

There are 7 chains in PDB entry 9H1O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ALA 34	LYS 95
B	MET 1	VAL 437
A	MET 1	VAL 437
D	MET 1	GLN 436
E	MET 1	GLN 436
F	MET 1	GLN 436
G	MET 1	GLN 436

There are128 helices in PDB entry 9H1O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	85	94	Right-handed alpha
Helix 2	AA2	B	10	28	Right-handed alpha
Helix 3	AA3	B	48	51	Right-handed 310
Helix 4	AA4	B	72	79	Right-handed alpha
Helix 5	AA5	B	81	85	Right-handed 310
Helix 6	AA6	B	102	108	Right-handed alpha
Helix 7	AA7	B	110	129	Right-handed alpha
Helix 8	AA8	B	144	161	Right-handed alpha
Helix 9	AA9	B	182	197	Right-handed alpha
Helix 10	AB1	B	205	216	Right-handed alpha
Helix 11	AB2	B	223	244	Right-handed alpha
Helix 12	AB3	B	251	260	Right-handed alpha
Helix 13	AB4	B	277	282	Right-handed alpha
Helix 14	AB5	B	287	295	Right-handed alpha
Helix 15	AB6	B	296	301	Right-handed 310
Helix 16	AB7	B	306	310	Right-handed 310
Helix 17	AB8	B	324	338	Right-handed alpha
Helix 18	AB9	B	383	401	Right-handed alpha
Helix 19	AC1	B	405	410	Right-handed alpha
Helix 20	AC2	B	415	435	Right-handed alpha
Helix 21	AC3	A	10	29	Right-handed alpha
Helix 22	AC4	A	47	51	Right-handed 310
Helix 23	AC5	A	72	79	Right-handed alpha
Helix 24	AC6	A	81	85	Right-handed 310
Helix 25	AC7	A	88	90	Right-handed 310
Helix 26	AC8	A	102	108	Right-handed alpha
Helix 27	AC9	A	109	128	Right-handed alpha
Helix 28	AD1	A	143	161	Right-handed alpha
Helix 29	AD2	A	182	197	Right-handed alpha
Helix 30	AD3	A	206	216	Right-handed alpha
Helix 31	AD4	A	223	244	Right-handed alpha
Helix 32	AD5	A	251	260	Right-handed alpha
Helix 33	AD6	A	279	284	Right-handed 310
Helix 34	AD7	A	287	296	Right-handed alpha
Helix 35	AD8	A	297	301	Right-handed 310
Helix 36	AD9	A	306	310	Right-handed 310
Helix 37	AE1	A	324	338	Right-handed alpha
Helix 38	AE2	A	384	401	Right-handed alpha
Helix 39	AE3	A	404	410	Right-handed alpha
Helix 40	AE4	A	415	435	Right-handed alpha
Helix 41	AE5	D	10	29	Right-handed alpha
Helix 42	AE6	D	40	48	Right-handed alpha
Helix 43	AE7	D	49	51	Right-handed 310
Helix 44	AE8	D	71	80	Right-handed alpha
Helix 45	AE9	D	83	87	Right-handed 310
Helix 46	AF1	D	88	90	Right-handed 310
Helix 47	AF2	D	102	108	Right-handed alpha
Helix 48	AF3	D	110	129	Right-handed alpha
Helix 49	AF4	D	144	161	Right-handed alpha
Helix 50	AF5	D	182	198	Right-handed alpha
Helix 51	AF6	D	205	216	Right-handed alpha
Helix 52	AF7	D	223	239	Right-handed alpha
Helix 53	AF8	D	240	243	Right-handed 310
Helix 54	AF9	D	251	260	Right-handed alpha
Helix 55	AG1	D	277	281	Right-handed 310
Helix 56	AG2	D	287	296	Right-handed alpha
Helix 57	AG3	D	306	310	Right-handed 310
Helix 58	AG4	D	324	339	Right-handed alpha
Helix 59	AG5	D	340	343	Right-handed 310
Helix 60	AG6	D	384	400	Right-handed alpha
Helix 61	AG7	D	404	410	Right-handed alpha
Helix 62	AG8	D	414	436	Right-handed alpha
Helix 63	AG9	E	10	29	Right-handed alpha
Helix 64	AH1	E	40	48	Right-handed alpha
Helix 65	AH2	E	49	51	Right-handed 310
Helix 66	AH3	E	71	80	Right-handed alpha
Helix 67	AH4	E	83	87	Right-handed 310
Helix 68	AH5	E	88	90	Right-handed 310
Helix 69	AH6	E	102	108	Right-handed alpha
Helix 70	AH7	E	110	128	Right-handed alpha
Helix 71	AH8	E	144	161	Right-handed alpha
Helix 72	AH9	E	182	195	Right-handed alpha
Helix 73	AI1	E	206	216	Right-handed alpha
Helix 74	AI2	E	223	239	Right-handed alpha
Helix 75	AI3	E	240	243	Right-handed 310
Helix 76	AI4	E	251	260	Right-handed alpha
Helix 77	AI5	E	280	284	Right-handed 310
Helix 78	AI6	E	287	297	Right-handed alpha
Helix 79	AI7	E	306	310	Right-handed 310
Helix 80	AI8	E	324	339	Right-handed alpha
Helix 81	AI9	E	340	343	Right-handed 310
Helix 82	AJ1	E	383	400	Right-handed alpha
Helix 83	AJ2	E	404	410	Right-handed alpha
Helix 84	AJ3	E	414	435	Right-handed alpha
Helix 85	AJ4	F	10	29	Right-handed alpha
Helix 86	AJ5	F	40	48	Right-handed alpha
Helix 87	AJ6	F	49	51	Right-handed 310
Helix 88	AJ7	F	71	80	Right-handed alpha
Helix 89	AJ8	F	83	87	Right-handed 310
Helix 90	AJ9	F	88	90	Right-handed 310
Helix 91	AK1	F	102	108	Right-handed alpha
Helix 92	AK2	F	110	129	Right-handed alpha
Helix 93	AK3	F	144	161	Right-handed alpha
Helix 94	AK4	F	182	198	Right-handed alpha
Helix 95	AK5	F	205	216	Right-handed alpha
Helix 96	AK6	F	223	239	Right-handed alpha
Helix 97	AK7	F	240	243	Right-handed 310
Helix 98	AK8	F	251	260	Right-handed alpha
Helix 99	AK9	F	287	296	Right-handed alpha
Helix 100	AL1	F	297	301	Right-handed 310
Helix 101	AL2	F	306	310	Right-handed 310
Helix 102	AL3	F	324	339	Right-handed alpha
Helix 103	AL4	F	340	343	Right-handed 310
Helix 104	AL5	F	384	400	Right-handed alpha
Helix 105	AL6	F	404	410	Right-handed alpha
Helix 106	AL7	F	414	436	Right-handed alpha
Helix 107	AL8	G	10	29	Right-handed alpha
Helix 108	AL9	G	40	48	Right-handed alpha
Helix 109	AM1	G	49	51	Right-handed 310
Helix 110	AM2	G	71	80	Right-handed alpha
Helix 111	AM3	G	88	90	Right-handed 310
Helix 112	AM4	G	102	108	Right-handed alpha
Helix 113	AM5	G	113	129	Right-handed alpha
Helix 114	AM6	G	144	161	Right-handed alpha
Helix 115	AM7	G	182	195	Right-handed alpha
Helix 116	AM8	G	205	216	Right-handed alpha
Helix 117	AM9	G	223	239	Right-handed alpha
Helix 118	AN1	G	240	243	Right-handed 310
Helix 119	AN2	G	251	260	Right-handed alpha
Helix 120	AN3	G	277	281	Right-handed 310
Helix 121	AN4	G	287	296	Right-handed alpha
Helix 122	AN5	G	297	301	Right-handed 310
Helix 123	AN6	G	306	310	Right-handed 310
Helix 124	AN7	G	324	339	Right-handed alpha
Helix 125	AN8	G	340	343	Right-handed 310
Helix 126	AN9	G	384	400	Right-handed alpha
Helix 127	AO1	G	404	410	Right-handed alpha
Helix 128	AO2	G	414	436	Right-handed alpha

There are 14 sheets in PDB entry 9H1O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	94	first strand
Strand 2	B	65	69	parallel
Strand 3	B	4	9	parallel
Strand 4	B	134	140	parallel
Strand 5	B	165	171	parallel
Strand 6	B	200	202	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	56	first strand
Strand 2	B	60	63	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	273	first strand
Strand 2	B	373	381	anti-parallel
Strand 3	B	312	321	anti-parallel
Strand 4	B	351	356	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	94	first strand
Strand 2	A	65	69	parallel
Strand 3	A	4	9	parallel
Strand 4	A	134	140	parallel
Strand 5	A	165	172	parallel
Strand 6	A	200	205	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	55	first strand
Strand 2	A	61	63	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	246	248	first strand
Strand 2	A	351	356	anti-parallel
Strand 3	A	312	321	parallel
Strand 4	A	373	381	anti-parallel
Strand 5	A	269	273	anti-parallel

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There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	94	first strand
Strand 2	D	65	69	parallel
Strand 3	D	3	9	parallel
Strand 4	D	132	140	parallel
Strand 5	D	165	171	parallel
Strand 6	D	200	204	parallel
Strand 7	D	267	273	parallel
Strand 8	D	373	381	anti-parallel
Strand 9	D	312	321	anti-parallel
Strand 10	D	351	356	parallel
Strand 11	D	246	248	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	56	first strand
Strand 2	D	60	63	anti-parallel

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There are 11 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	92	94	first strand
Strand 2	E	65	69	parallel
Strand 3	E	3	9	parallel
Strand 4	E	132	140	parallel
Strand 5	E	165	172	parallel
Strand 6	E	200	205	parallel
Strand 7	E	267	273	parallel
Strand 8	E	373	381	anti-parallel
Strand 9	E	312	321	anti-parallel
Strand 10	E	351	356	parallel
Strand 11	E	246	248	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	56	first strand
Strand 2	E	60	63	anti-parallel

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There are 11 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	92	94	first strand
Strand 2	F	65	69	parallel
Strand 3	F	3	9	parallel
Strand 4	F	132	140	parallel
Strand 5	F	165	171	parallel
Strand 6	F	200	204	parallel
Strand 7	F	267	273	parallel
Strand 8	F	373	381	anti-parallel
Strand 9	F	312	321	anti-parallel
Strand 10	F	351	356	parallel
Strand 11	F	246	248	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	56	first strand
Strand 2	F	60	63	anti-parallel

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There are 11 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	92	94	first strand
Strand 2	G	65	69	parallel
Strand 3	G	3	9	parallel
Strand 4	G	132	140	parallel
Strand 5	G	165	171	parallel
Strand 6	G	200	204	parallel
Strand 7	G	267	273	parallel
Strand 8	G	373	381	anti-parallel
Strand 9	G	312	321	anti-parallel
Strand 10	G	351	356	parallel
Strand 11	G	246	248	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	56	first strand
Strand 2	G	60	63	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9H1O

Analysis of interatomic Contacts of Structural Units in PDB entry:
9H1O