Analysis of interatomic Contacts of Structural Units in PDB entry:
9H1Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H1Q entry

There are 5 chains in PDB entry 9H1Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 20ILE 1237
B
 ILE 133PRO 182
C
 ILE 133THR 166
D
 ILE 133THR 166
E
 ILE 133THR 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 9H1Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 42Right-handed alpha
Helix 2
AA2
A
45 54Right-handed alpha
Helix 3
AA3
A
61 64Right-handed 310
Helix 4
AA4
A
65 70Right-handed alpha
Helix 5
AA5
A
81 100Right-handed alpha
Helix 6
AA6
A
104 118Right-handed alpha
Helix 7
AA7
A
118 139Right-handed alpha
Helix 8
AA8
A
176 202Right-handed alpha
Helix 9
AA9
A
208 221Right-handed alpha
Helix 10
AB1
A
225 248Right-handed alpha
Helix 11
AB2
A
255 260Right-handed alpha
Helix 12
AB3
A
261 266Right-handed alpha
Helix 13
AB4
A
266 280Right-handed alpha
Helix 14
AB5
A
280 289Right-handed alpha
Helix 15
AB6
A
300 312Right-handed alpha
Helix 16
AB7
A
318 346Right-handed alpha
Helix 17
AB8
A
358 368Right-handed alpha
Helix 18
AB9
A
371 382Right-handed 310
Helix 19
AC1
A
397 402Right-handed alpha
Helix 20
AC2
A
410 417Right-handed 310
Helix 21
AC3
A
419 428Right-handed alpha
Helix 22
AC4
A
442 449Right-handed alpha
Helix 23
AC5
A
454 459Right-handed alpha
Helix 24
AC6
A
459 465Right-handed alpha
Helix 25
AC7
A
468 471Right-handed 310
Helix 26
AC8
A
494 512Right-handed alpha
Helix 27
AC9
A
513 515Right-handed 310
Helix 28
AD1
A
516 521Right-handed alpha
Helix 29
AD2
A
524 540Right-handed alpha
Helix 30
AD3
A
559 575Right-handed alpha
Helix 31
AD4
A
578 586Right-handed alpha
Helix 32
AD5
A
587 589Right-handed 310
Helix 33
AD6
A
627 645Right-handed alpha
Helix 34
AD7
A
670 688Right-handed alpha
Helix 35
AD8
A
694 696Right-handed 310
Helix 36
AD9
A
720 725Right-handed alpha
Helix 37
AE1
A
738 756Right-handed alpha
Helix 38
AE2
A
759 779Right-handed alpha
Helix 39
AE3
A
780 785Right-handed alpha
Helix 40
AE4
A
786 796Right-handed alpha
Helix 41
AE5
A
809 813Right-handed 310
Helix 42
AE6
A
819 835Right-handed alpha
Helix 43
AE7
A
838 847Right-handed alpha
Helix 44
AE8
A
855 862Right-handed alpha
Helix 45
AE9
A
877 888Right-handed alpha
Helix 46
AF1
A
893 899Right-handed alpha
Helix 47
AF2
A
902 915Right-handed alpha
Helix 48
AF3
A
921 931Right-handed alpha
Helix 49
AF4
A
932 947Right-handed alpha
Helix 50
AF5
A
947 955Right-handed alpha
Helix 51
AF6
A
962 979Right-handed alpha
Helix 52
AF7
A
986 990Right-handed 310
Helix 53
AF8
A
993 1007Right-handed alpha
Helix 54
AF9
A
1017 1021Right-handed alpha
Helix 55
AG1
A
1028 1030Right-handed 310
Helix 56
AG2
A
1031 1036Right-handed 310
Helix 57
AG3
A
1048 1054Right-handed 310
Helix 58
AG4
A
1084 1101Right-handed alpha
Helix 59
AG5
A
1104 1119Right-handed alpha
Helix 60
AG6
A
1151 1156Right-handed alpha
Helix 61
AG7
A
1177 1196Right-handed alpha
Helix 62
AG8
B
135 167Right-handed alpha
Helix 63
AG9
C
134 137Right-handed 310
Helix 64
AH1
C
138 165Right-handed alpha
Helix 65
AH2
D
134 166Right-handed alpha
Helix 66
AH3
E
135 166Right-handed alpha
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There are 6 sheets in PDB entry 9H1Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
170 175parallel
Strand 3
A
162 166anti-parallel
Strand 4
A
154 159anti-parallel
Strand 5
A
149 151anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 353first strand
Strand 2
A
384 386anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 493first strand
Strand 2
A
473 478anti-parallel
Strand 3
A
591 594parallel
Strand 4
A
615 617anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
653 654first strand
Strand 2
A
658 664anti-parallel
Strand 3
A
544 550anti-parallel
Strand 4
A
698 701anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
704 706first strand
Strand 2
A
711 713anti-parallel
Strand 3
A
716 717anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1022 1026first strand
Strand 2
A
1204 1208anti-parallel
Strand 3
A
1038 1041anti-parallel
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