Analysis of interatomic Contacts of Structural Units in PDB entry:
9H1Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H1Z entry

There are 2 chains in PDB entry 9H1Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 7GLN 686
B
 GLN 7GLN 686
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 9H1Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 11Right-handed 310
Helix 2
AA2
A
15 24Right-handed alpha
Helix 3
AA3
A
27 45Right-handed alpha
Helix 4
AA4
A
61 65Right-handed alpha
Helix 5
AA5
A
86 93Right-handed 310
Helix 6
AA6
A
94 108Right-handed alpha
Helix 7
AA7
A
111 116Right-handed 310
Helix 8
AA8
A
147 152Right-handed 310
Helix 9
AA9
A
156 170Right-handed alpha
Helix 10
AB1
A
175 180Right-handed 310
Helix 11
AB2
A
181 190Right-handed alpha
Helix 12
AB3
A
193 214Right-handed alpha
Helix 13
AB4
A
221 237Right-handed alpha
Helix 14
AB5
A
243 257Right-handed alpha
Helix 15
AB6
A
273 285Right-handed alpha
Helix 16
AB7
A
304 320Right-handed alpha
Helix 17
AB8
A
339 343Right-handed 310
Helix 18
AB9
A
344 346Right-handed 310
Helix 19
AC1
A
347 356Right-handed alpha
Helix 20
AC2
A
359 381Right-handed alpha
Helix 21
AC3
A
424 447Right-handed alpha
Helix 22
AC4
A
499 511Right-handed alpha
Helix 23
AC5
A
520 523Right-handed 310
Helix 24
AC6
A
524 533Right-handed alpha
Helix 25
AC7
A
536 558Right-handed alpha
Helix 26
AC8
A
559 561Right-handed 310
Helix 27
AC9
A
565 581Right-handed alpha
Helix 28
AD1
A
587 601Right-handed alpha
Helix 29
AD2
A
617 628Right-handed alpha
Helix 30
AD3
A
652 664Right-handed alpha
Helix 31
AD4
A
665 670Right-handed 310
Helix 32
AD5
B
7 11Right-handed 310
Helix 33
AD6
B
15 24Right-handed alpha
Helix 34
AD7
B
27 46Right-handed alpha
Helix 35
AD8
B
61 65Right-handed alpha
Helix 36
AD9
B
86 91Right-handed 310
Helix 37
AE1
B
92 93Right-handed 310
Helix 38
AE2
B
94 109Right-handed alpha
Helix 39
AE3
B
111 116Right-handed 310
Helix 40
AE4
B
147 152Right-handed 310
Helix 41
AE5
B
156 170Right-handed alpha
Helix 42
AE6
B
175 180Right-handed 310
Helix 43
AE7
B
181 190Right-handed alpha
Helix 44
AE8
B
193 214Right-handed alpha
Helix 45
AE9
B
221 236Right-handed alpha
Helix 46
AF1
B
243 257Right-handed alpha
Helix 47
AF2
B
273 285Right-handed alpha
Helix 48
AF3
B
304 320Right-handed alpha
Helix 49
AF4
B
339 343Right-handed 310
Helix 50
AF5
B
344 346Right-handed 310
Helix 51
AF6
B
347 356Right-handed alpha
Helix 52
AF7
B
359 381Right-handed alpha
Helix 53
AF8
B
424 447Right-handed alpha
Helix 54
AF9
B
499 511Right-handed alpha
Helix 55
AG1
B
520 523Right-handed 310
Helix 56
AG2
B
524 533Right-handed alpha
Helix 57
AG3
B
536 558Right-handed alpha
Helix 58
AG4
B
565 581Right-handed alpha
Helix 59
AG5
B
587 601Right-handed alpha
Helix 60
AG6
B
619 629Right-handed alpha
Helix 61
AG7
B
652 664Right-handed alpha
Helix 62
AG8
B
665 670Right-handed 310
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There are 7 sheets in PDB entry 9H1Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 60first strand
Strand 2
A
72 81anti-parallel
Strand 3
A
137 144parallel
Strand 4
A
128 132anti-parallel
Strand 5
A
118 121anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
290 291parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 394first strand
Strand 2
A
407 414anti-parallel
Strand 3
A
477 485parallel
Strand 4
A
465 470anti-parallel
Strand 5
A
453 454anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 607first strand
Strand 2
A
634 635parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 60first strand
Strand 2
B
72 81anti-parallel
Strand 3
B
136 144parallel
Strand 4
B
128 133anti-parallel
Strand 5
B
118 121anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 263first strand
Strand 2
B
290 291parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
390 394first strand
Strand 2
B
407 414anti-parallel
Strand 3
B
477 485parallel
Strand 4
B
465 470anti-parallel
Strand 5
B
453 454anti-parallel
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