Analysis of interatomic Contacts of Structural Units in PDB entry:
9H2C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H2C entry

There are 4 chains in PDB entry 9H2C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 7LYS 290
B
 SER 38PHE 271
C
 LEU 113HIS 334
D
 GLU 112HIS 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 9H2C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 38Right-handed alpha
Helix 2
AA2
A
39 61Right-handed alpha
Helix 3
AA3
A
66 73Right-handed alpha
Helix 4
AA4
A
76 96Right-handed alpha
Helix 5
AA5
A
113 117Right-handed 310
Helix 6
AA6
A
138 147Right-handed alpha
Helix 7
AA7
A
162 171Right-handed alpha
Helix 8
AA8
A
202 240Right-handed alpha
Helix 9
AA9
A
243 250Right-handed alpha
Helix 10
AB1
A
259 264Right-handed 310
Helix 11
AB2
A
270 276Right-handed alpha
Helix 12
AB3
B
39 61Right-handed alpha
Helix 13
AB4
B
66 72Right-handed alpha
Helix 14
AB5
B
76 96Right-handed alpha
Helix 15
AB6
B
113 117Right-handed 310
Helix 16
AB7
B
138 146Right-handed alpha
Helix 17
AB8
B
202 240Right-handed alpha
Helix 18
AB9
B
242 247Right-handed alpha
Helix 19
AC1
B
249 251Right-handed 310
Helix 20
AC2
B
252 257Right-handed alpha
Helix 21
AC3
B
258 262Right-handed 310
Helix 22
AC4
C
115 131Right-handed alpha
Helix 23
AC5
C
141 155Right-handed alpha
Helix 24
AC6
C
158 167Right-handed alpha
Helix 25
AC7
C
168 170Right-handed 310
Helix 26
AC8
C
179 195Right-handed alpha
Helix 27
AC9
C
202 219Right-handed alpha
Helix 28
AD1
C
242 257Right-handed alpha
Helix 29
AD2
C
274 286Right-handed alpha
Helix 30
AD3
C
289 312Right-handed alpha
Helix 31
AD4
C
317 333Right-handed alpha
Helix 32
AD5
D
115 132Right-handed alpha
Helix 33
AD6
D
141 155Right-handed alpha
Helix 34
AD7
D
158 167Right-handed alpha
Helix 35
AD8
D
179 194Right-handed alpha
Helix 36
AD9
D
202 218Right-handed alpha
Helix 37
AE1
D
242 256Right-handed alpha
Helix 38
AE2
D
274 285Right-handed alpha
Helix 39
AE3
D
289 312Right-handed alpha
Helix 40
AE4
D
317 325Right-handed alpha
Helix 41
AE5
D
326 334Right-handed alpha
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There are 5 sheets in PDB entry 9H2C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 27first strand
Strand 2
A
8 15anti-parallel
Strand 3
B
264 270anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 127first strand
Strand 2
A
132 137anti-parallel
Strand 3
A
106 111parallel
Strand 4
C
261 263anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 268first strand
Strand 2
D
227 230anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 128first strand
Strand 2
B
131 137anti-parallel
Strand 3
B
105 111parallel
Strand 4
D
260 263anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
227 228first strand
Strand 2
D
223 224parallel
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