Analysis of interatomic Contacts of Structural Units in PDB entry:
9H2D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H2D entry

There are 2 chains in PDB entry 9H2D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1471PRO 1742
B
 ASN 1477LEU 1741
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9H2D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1477 1490Right-handed alpha
Helix 2
AA2
A
1496 1498Right-handed 310
Helix 3
AA3
A
1499 1521Right-handed alpha
Helix 4
AA4
A
1525 1549Right-handed alpha
Helix 5
AA5
A
1550 1552Right-handed 310
Helix 6
AA6
A
1553 1565Right-handed alpha
Helix 7
AA7
A
1566 1568Right-handed 310
Helix 8
AA8
A
1572 1587Right-handed alpha
Helix 9
AA9
A
1589 1610Right-handed alpha
Helix 10
AB1
A
1617 1621Right-handed 310
Helix 11
AB2
A
1638 1653Right-handed alpha
Helix 12
AB3
A
1709 1723Right-handed alpha
Helix 13
AB4
A
1724 1739Right-handed alpha
Helix 14
AB5
B
1478 1490Right-handed alpha
Helix 15
AB6
B
1496 1498Right-handed 310
Helix 16
AB7
B
1499 1518Right-handed alpha
Helix 17
AB8
B
1526 1549Right-handed alpha
Helix 18
AB9
B
1550 1552Right-handed 310
Helix 19
AC1
B
1553 1565Right-handed alpha
Helix 20
AC2
B
1566 1568Right-handed 310
Helix 21
AC3
B
1572 1587Right-handed alpha
Helix 22
AC4
B
1589 1610Right-handed alpha
Helix 23
AC5
B
1617 1621Right-handed 310
Helix 24
AC6
B
1638 1655Right-handed alpha
Helix 25
AC7
B
1709 1723Right-handed alpha
Helix 26
AC8
B
1724 1739Right-handed alpha
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There are 2 sheets in PDB entry 9H2D. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1697 1699first strand
Strand 2
A
1706 1708anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1697 1699first strand
Strand 2
B
1706 1708anti-parallel
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