Analysis of interatomic Contacts of Structural Units in PDB entry:
9H2H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9H2H entry

There are 22 chains in PDB entry 9H2H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 17	VAL 365
B	PRO 7	VAL 365
C	LYS 17	VAL 365
D	PRO 7	VAL 365
E	T 1	G 58
F	C 1	A 58
G	ASN 7	SER 276
H	LYS 46	ASP 270
I	LEU 113	ILE 331
J	GLU 112	VAL 327
K	ASN 7	ASP 270
L	LYS 48	ASP 270
M	LEU 113	ILE 331
N	GLU 112	PHE 325
O	ASN 7	SER 276
P	LEU 45	ASP 270
Q	LEU 113	ILE 331
R	GLU 112	PHE 325
S	VAL 9	SER 276
T	THR 44	ASP 270
U	LEU 113	ILE 331
V	GLU 112	VAL 327

There are200 helices in PDB entry 9H2H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	52	58	Right-handed alpha
Helix 2	AA2	A	68	70	Right-handed 310
Helix 3	AA3	A	76	82	Right-handed 310
Helix 4	AA4	A	123	140	Right-handed alpha
Helix 5	AA5	A	196	203	Right-handed alpha
Helix 6	AA6	A	211	235	Right-handed alpha
Helix 7	AA7	A	239	243	Right-handed 310
Helix 8	AA8	A	249	258	Right-handed alpha
Helix 9	AA9	A	269	272	Right-handed 310
Helix 10	AB1	A	279	284	Right-handed 310
Helix 11	AB2	A	287	298	Right-handed alpha
Helix 12	AB3	A	299	302	Right-handed 310
Helix 13	AB4	A	306	311	Right-handed alpha
Helix 14	AB5	A	312	315	Right-handed 310
Helix 15	AB6	A	336	358	Right-handed alpha
Helix 16	AB7	A	361	365	Right-handed 310
Helix 17	AB8	B	53	58	Right-handed 310
Helix 18	AB9	B	76	82	Right-handed alpha
Helix 19	AC1	B	123	140	Right-handed alpha
Helix 20	AC2	B	196	201	Right-handed alpha
Helix 21	AC3	B	211	235	Right-handed alpha
Helix 22	AC4	B	239	243	Right-handed 310
Helix 23	AC5	B	249	258	Right-handed alpha
Helix 24	AC6	B	280	284	Right-handed 310
Helix 25	AC7	B	286	298	Right-handed alpha
Helix 26	AC8	B	299	302	Right-handed 310
Helix 27	AC9	B	305	309	Right-handed 310
Helix 28	AD1	B	311	315	Right-handed 310
Helix 29	AD2	B	336	358	Right-handed alpha
Helix 30	AD3	C	68	70	Right-handed 310
Helix 31	AD4	C	76	82	Right-handed 310
Helix 32	AD5	C	123	139	Right-handed alpha
Helix 33	AD6	C	196	201	Right-handed alpha
Helix 34	AD7	C	211	235	Right-handed alpha
Helix 35	AD8	C	239	243	Right-handed 310
Helix 36	AD9	C	249	258	Right-handed alpha
Helix 37	AE1	C	279	284	Right-handed 310
Helix 38	AE2	C	286	299	Right-handed alpha
Helix 39	AE3	C	300	302	Right-handed 310
Helix 40	AE4	C	305	309	Right-handed 310
Helix 41	AE5	C	337	357	Right-handed alpha
Helix 42	AE6	D	54	58	Right-handed 310
Helix 43	AE7	D	68	70	Right-handed 310
Helix 44	AE8	D	76	82	Right-handed 310
Helix 45	AE9	D	123	140	Right-handed alpha
Helix 46	AF1	D	196	201	Right-handed alpha
Helix 47	AF2	D	211	235	Right-handed alpha
Helix 48	AF3	D	239	243	Right-handed 310
Helix 49	AF4	D	249	258	Right-handed alpha
Helix 50	AF5	D	279	284	Right-handed 310
Helix 51	AF6	D	286	298	Right-handed alpha
Helix 52	AF7	D	299	302	Right-handed 310
Helix 53	AF8	D	305	309	Right-handed 310
Helix 54	AF9	D	338	357	Right-handed alpha
Helix 55	AG1	D	361	365	Right-handed 310
Helix 56	AG2	G	28	61	Right-handed alpha
Helix 57	AG3	G	66	73	Right-handed alpha
Helix 58	AG4	G	76	96	Right-handed alpha
Helix 59	AG5	G	138	147	Right-handed alpha
Helix 60	AG6	G	162	172	Right-handed alpha
Helix 61	AG7	G	202	230	Right-handed alpha
Helix 62	AG8	G	230	240	Right-handed alpha
Helix 63	AG9	G	242	249	Right-handed alpha
Helix 64	AH1	G	260	264	Right-handed 310
Helix 65	AH2	G	270	276	Right-handed alpha
Helix 66	AH3	H	47	62	Right-handed alpha
Helix 67	AH4	H	69	73	Right-handed alpha
Helix 68	AH5	H	76	96	Right-handed alpha
Helix 69	AH6	H	113	117	Right-handed 310
Helix 70	AH7	H	137	147	Right-handed alpha
Helix 71	AH8	H	162	170	Right-handed alpha
Helix 72	AH9	H	202	229	Right-handed alpha
Helix 73	AI1	H	230	240	Right-handed alpha
Helix 74	AI2	H	255	264	Right-handed 310
Helix 75	AI3	I	115	132	Right-handed alpha
Helix 76	AI4	I	141	155	Right-handed alpha
Helix 77	AI5	I	158	168	Right-handed alpha
Helix 78	AI6	I	179	195	Right-handed alpha
Helix 79	AI7	I	202	218	Right-handed alpha
Helix 80	AI8	I	242	256	Right-handed alpha
Helix 81	AI9	I	274	286	Right-handed alpha
Helix 82	AJ1	I	289	313	Right-handed alpha
Helix 83	AJ2	I	317	331	Right-handed alpha
Helix 84	AJ3	J	115	133	Right-handed alpha
Helix 85	AJ4	J	141	155	Right-handed alpha
Helix 86	AJ5	J	158	169	Right-handed alpha
Helix 87	AJ6	J	179	193	Right-handed alpha
Helix 88	AJ7	J	202	219	Right-handed alpha
Helix 89	AJ8	J	242	256	Right-handed alpha
Helix 90	AJ9	J	275	286	Right-handed alpha
Helix 91	AK1	J	289	312	Right-handed alpha
Helix 92	AK2	J	317	325	Right-handed alpha
Helix 93	AK3	K	28	60	Right-handed alpha
Helix 94	AK4	K	66	73	Right-handed alpha
Helix 95	AK5	K	77	96	Right-handed alpha
Helix 96	AK6	K	138	146	Right-handed alpha
Helix 97	AK7	K	162	171	Right-handed alpha
Helix 98	AK8	K	202	240	Right-handed alpha
Helix 99	AK9	K	241	249	Right-handed alpha
Helix 100	AL1	K	260	264	Right-handed 310
Helix 101	AL2	L	49	59	Right-handed alpha
Helix 102	AL3	L	69	73	Right-handed alpha
Helix 103	AL4	L	87	96	Right-handed alpha
Helix 104	AL5	L	138	147	Right-handed alpha
Helix 105	AL6	L	162	171	Right-handed alpha
Helix 106	AL7	L	204	230	Right-handed alpha
Helix 107	AL8	L	230	240	Right-handed alpha
Helix 108	AL9	L	260	264	Right-handed 310
Helix 109	AM1	M	115	131	Right-handed alpha
Helix 110	AM2	M	141	155	Right-handed alpha
Helix 111	AM3	M	158	170	Right-handed alpha
Helix 112	AM4	M	179	195	Right-handed alpha
Helix 113	AM5	M	202	219	Right-handed alpha
Helix 114	AM6	M	242	257	Right-handed alpha
Helix 115	AM7	M	274	286	Right-handed alpha
Helix 116	AM8	M	289	312	Right-handed alpha
Helix 117	AM9	M	317	331	Right-handed alpha
Helix 118	AN1	N	115	133	Right-handed alpha
Helix 119	AN2	N	141	155	Right-handed alpha
Helix 120	AN3	N	158	169	Right-handed alpha
Helix 121	AN4	N	179	194	Right-handed alpha
Helix 122	AN5	N	202	218	Right-handed alpha
Helix 123	AN6	N	242	254	Right-handed alpha
Helix 124	AN7	N	274	284	Right-handed alpha
Helix 125	AN8	N	289	312	Right-handed alpha
Helix 126	AN9	N	320	325	Right-handed alpha
Helix 127	AO1	O	28	61	Right-handed alpha
Helix 128	AO2	O	66	73	Right-handed alpha
Helix 129	AO3	O	76	96	Right-handed alpha
Helix 130	AO4	O	113	117	Right-handed 310
Helix 131	AO5	O	138	147	Right-handed alpha
Helix 132	AO6	O	162	172	Right-handed alpha
Helix 133	AO7	O	202	240	Right-handed alpha
Helix 134	AO8	O	242	249	Right-handed alpha
Helix 135	AO9	O	270	275	Right-handed alpha
Helix 136	AP1	P	46	62	Right-handed alpha
Helix 137	AP2	P	68	73	Right-handed alpha
Helix 138	AP3	P	76	96	Right-handed alpha
Helix 139	AP4	P	113	117	Right-handed 310
Helix 140	AP5	P	137	147	Right-handed alpha
Helix 141	AP6	P	162	172	Right-handed alpha
Helix 142	AP7	P	204	229	Right-handed alpha
Helix 143	AP8	P	230	240	Right-handed alpha
Helix 144	AP9	P	255	264	Right-handed 310
Helix 145	AQ1	Q	115	131	Right-handed alpha
Helix 146	AQ2	Q	141	155	Right-handed alpha
Helix 147	AQ3	Q	158	169	Right-handed alpha
Helix 148	AQ4	Q	179	195	Right-handed alpha
Helix 149	AQ5	Q	202	218	Right-handed alpha
Helix 150	AQ6	Q	243	257	Right-handed alpha
Helix 151	AQ7	Q	274	286	Right-handed alpha
Helix 152	AQ8	Q	289	313	Right-handed alpha
Helix 153	AQ9	Q	317	331	Right-handed alpha
Helix 154	AR1	R	115	133	Right-handed alpha
Helix 155	AR2	R	141	155	Right-handed alpha
Helix 156	AR3	R	158	169	Right-handed alpha
Helix 157	AR4	R	179	193	Right-handed alpha
Helix 158	AR5	R	202	218	Right-handed alpha
Helix 159	AR6	R	242	256	Right-handed alpha
Helix 160	AR7	R	274	285	Right-handed alpha
Helix 161	AR8	R	289	313	Right-handed alpha
Helix 162	AR9	R	321	325	Right-handed alpha
Helix 163	AS1	S	27	60	Right-handed alpha
Helix 164	AS2	S	66	73	Right-handed alpha
Helix 165	AS3	S	77	96	Right-handed alpha
Helix 166	AS4	S	113	117	Right-handed 310
Helix 167	AS5	S	138	147	Right-handed alpha
Helix 168	AS6	S	202	240	Right-handed alpha
Helix 169	AS7	S	241	252	Right-handed alpha
Helix 170	AS8	S	260	264	Right-handed 310
Helix 171	AS9	S	270	276	Right-handed alpha
Helix 172	AT1	T	45	62	Right-handed alpha
Helix 173	AT2	T	68	73	Right-handed alpha
Helix 174	AT3	T	76	96	Right-handed alpha
Helix 175	AT4	T	113	117	Right-handed 310
Helix 176	AT5	T	138	146	Right-handed alpha
Helix 177	AT6	T	163	172	Right-handed alpha
Helix 178	AT7	T	202	230	Right-handed alpha
Helix 179	AT8	T	230	240	Right-handed alpha
Helix 180	AT9	T	241	244	Right-handed 310
Helix 181	AU1	T	255	258	Right-handed 310
Helix 182	AU2	T	259	264	Right-handed alpha
Helix 183	AU3	U	115	132	Right-handed alpha
Helix 184	AU4	U	141	155	Right-handed alpha
Helix 185	AU5	U	158	170	Right-handed alpha
Helix 186	AU6	U	179	195	Right-handed alpha
Helix 187	AU7	U	202	219	Right-handed alpha
Helix 188	AU8	U	242	256	Right-handed alpha
Helix 189	AU9	U	274	286	Right-handed alpha
Helix 190	AV1	U	289	312	Right-handed alpha
Helix 191	AV2	U	317	331	Right-handed alpha
Helix 192	AV3	V	115	133	Right-handed alpha
Helix 193	AV4	V	141	155	Right-handed alpha
Helix 194	AV5	V	158	169	Right-handed alpha
Helix 195	AV6	V	181	194	Right-handed alpha
Helix 196	AV7	V	202	219	Right-handed alpha
Helix 197	AV8	V	242	257	Right-handed alpha
Helix 198	AV9	V	275	286	Right-handed alpha
Helix 199	AW1	V	289	313	Right-handed alpha
Helix 200	AW2	V	317	325	Right-handed alpha

There are 34 sheets in PDB entry 9H2H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	44	first strand
Strand 2	A	59	66	anti-parallel
Strand 3	A	98	105	anti-parallel
Strand 4	A	89	95	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	115	first strand
Strand 2	A	157	160	anti-parallel
Strand 3	A	164	166	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	149	first strand
Strand 2	A	171	174	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	177	first strand
Strand 2	A	208	209	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	260	first strand
Strand 2	A	263	267	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	44	first strand
Strand 2	B	59	66	anti-parallel
Strand 3	B	98	105	anti-parallel
Strand 4	B	89	94	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	149	first strand
Strand 2	B	171	177	anti-parallel
Strand 3	B	208	209	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	44	first strand
Strand 2	C	59	66	anti-parallel
Strand 3	C	98	105	anti-parallel
Strand 4	C	89	95	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	114	115	first strand
Strand 2	C	157	159	anti-parallel
Strand 3	C	164	166	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	149	first strand
Strand 2	C	171	177	anti-parallel
Strand 3	C	208	209	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	204	205	first strand
Strand 2	D	24	25	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	43	first strand
Strand 2	D	59	66	anti-parallel
Strand 3	D	98	105	anti-parallel
Strand 4	D	89	91	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	43	first strand
Strand 2	D	59	66	anti-parallel
Strand 3	D	98	105	anti-parallel
Strand 4	D	94	95	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	114	115	first strand
Strand 2	D	157	159	anti-parallel
Strand 3	D	164	166	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	149	first strand
Strand 2	D	171	175	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	177	178	first strand
Strand 2	D	209	210	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	8	14	first strand
Strand 2	G	21	27	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	124	125	first strand
Strand 2	G	133	137	anti-parallel
Strand 3	G	106	111	parallel
Strand 4	I	261	263	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	265	268	first strand
Strand 2	J	227	230	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	106	107	first strand
Strand 2	J	262	263	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	227	228	first strand
Strand 2	J	223	224	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	8	14	first strand
Strand 2	K	21	27	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	124	127	first strand
Strand 2	K	132	137	anti-parallel
Strand 3	K	107	111	parallel
Strand 4	M	261	262	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	265	268	first strand
Strand 2	N	227	230	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	108	111	first strand
Strand 2	L	134	137	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	226	228	first strand
Strand 2	N	222	224	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	8	9	first strand
Strand 2	O	26	27	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	12	14	first strand
Strand 2	O	21	23	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	124	127	first strand
Strand 2	O	132	137	anti-parallel
Strand 3	O	106	111	parallel
Strand 4	Q	262	263	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	227	228	first strand
Strand 2	R	223	224	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	10	14	first strand
Strand 2	S	21	25	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	124	127	first strand
Strand 2	S	132	137	anti-parallel
Strand 3	S	106	111	parallel
Strand 4	U	261	263	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	267	268	first strand
Strand 2	V	227	228	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	123	127	first strand
Strand 2	T	132	137	anti-parallel
Strand 3	T	106	111	parallel
Strand 4	V	261	263	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9H2H

Analysis of interatomic Contacts of Structural Units in PDB entry:
9H2H