Analysis of interatomic Contacts of Structural Units in PDB entry:
9H2J

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9H2J entry

There are 16 chains in PDB entry 9H2J (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 7	ASN 275
B	SER 41	PHE 271
C	LEU 113	ILE 331
D	GLU 112	MET 328
E	LEU 7	SER 475
F	ARG 14	GLU 307
G	LEU 3	ASN 309
H	VAL 462	VAL 690
I	SER 487	PHE 662
J	ILE 490	LYS 668
K	MET 1	LEU 390
L	ASN 50	TYR 301
M	ARG 14	ARG 312
N	VAL 310	ASP 386
O	MET 1	ILE 168
P	ASP 308	ASP 386

There are143 helices in PDB entry 9H2J. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	61	Right-handed alpha
Helix 2	AA2	A	66	73	Right-handed alpha
Helix 3	AA3	A	76	96	Right-handed alpha
Helix 4	AA4	A	113	117	Right-handed 310
Helix 5	AA5	A	138	147	Right-handed alpha
Helix 6	AA6	A	162	170	Right-handed alpha
Helix 7	AA7	A	202	230	Right-handed alpha
Helix 8	AA8	A	230	240	Right-handed alpha
Helix 9	AA9	A	243	250	Right-handed alpha
Helix 10	AB1	A	251	256	Right-handed alpha
Helix 11	AB2	A	259	264	Right-handed 310
Helix 12	AB3	A	270	275	Right-handed alpha
Helix 13	AB4	B	42	62	Right-handed alpha
Helix 14	AB5	B	66	73	Right-handed alpha
Helix 15	AB6	B	76	95	Right-handed alpha
Helix 16	AB7	B	137	147	Right-handed alpha
Helix 17	AB8	B	162	172	Right-handed alpha
Helix 18	AB9	B	202	229	Right-handed alpha
Helix 19	AC1	B	230	240	Right-handed alpha
Helix 20	AC2	B	255	259	Right-handed 310
Helix 21	AC3	B	260	264	Right-handed 310
Helix 22	AC4	C	115	132	Right-handed alpha
Helix 23	AC5	C	141	155	Right-handed alpha
Helix 24	AC6	C	158	169	Right-handed alpha
Helix 25	AC7	C	179	195	Right-handed alpha
Helix 26	AC8	C	202	219	Right-handed alpha
Helix 27	AC9	C	242	257	Right-handed alpha
Helix 28	AD1	C	274	286	Right-handed alpha
Helix 29	AD2	C	289	313	Right-handed alpha
Helix 30	AD3	C	317	331	Right-handed alpha
Helix 31	AD4	D	115	133	Right-handed alpha
Helix 32	AD5	D	141	155	Right-handed alpha
Helix 33	AD6	D	158	169	Right-handed alpha
Helix 34	AD7	D	179	194	Right-handed alpha
Helix 35	AD8	D	202	219	Right-handed alpha
Helix 36	AD9	D	242	256	Right-handed alpha
Helix 37	AE1	D	276	286	Right-handed alpha
Helix 38	AE2	D	289	313	Right-handed alpha
Helix 39	AE3	D	317	325	Right-handed alpha
Helix 40	AE4	E	11	13	Right-handed 310
Helix 41	AE5	E	14	23	Right-handed alpha
Helix 42	AE6	E	33	45	Right-handed alpha
Helix 43	AE7	E	47	51	Right-handed 310
Helix 44	AE8	E	52	67	Right-handed alpha
Helix 45	AE9	E	77	82	Right-handed alpha
Helix 46	AF1	E	122	138	Right-handed alpha
Helix 47	AF2	E	192	202	Right-handed alpha
Helix 48	AF3	E	250	265	Right-handed alpha
Helix 49	AF4	E	276	280	Right-handed 310
Helix 50	AF5	E	283	292	Right-handed alpha
Helix 51	AF6	E	311	315	Right-handed 310
Helix 52	AF7	E	398	402	Right-handed 310
Helix 53	AF8	E	422	424	Right-handed 310
Helix 54	AF9	E	455	459	Right-handed 310
Helix 55	AG1	E	460	472	Right-handed alpha
Helix 56	AG2	F	37	42	Right-handed alpha
Helix 57	AG3	F	49	58	Right-handed alpha
Helix 58	AG4	F	100	105	Right-handed alpha
Helix 59	AG5	F	106	110	Right-handed 310
Helix 60	AG6	F	111	122	Right-handed alpha
Helix 61	AG7	F	124	137	Right-handed alpha
Helix 62	AG8	F	145	163	Right-handed alpha
Helix 63	AG9	F	192	200	Right-handed alpha
Helix 64	AH1	F	201	212	Right-handed alpha
Helix 65	AH2	G	5	9	Right-handed 310
Helix 66	AH3	G	18	22	Right-handed 310
Helix 67	AH4	G	37	42	Right-handed 310
Helix 68	AH5	G	49	58	Right-handed alpha
Helix 69	AH6	G	88	91	Right-handed 310
Helix 70	AH7	G	97	105	Right-handed alpha
Helix 71	AH8	G	111	122	Right-handed alpha
Helix 72	AH9	G	124	137	Right-handed alpha
Helix 73	AI1	G	144	172	Right-handed alpha
Helix 74	AI2	G	192	200	Right-handed alpha
Helix 75	AI3	G	202	212	Right-handed alpha
Helix 76	AI4	G	280	285	Right-handed alpha
Helix 77	AI5	H	465	488	Right-handed alpha
Helix 78	AI6	H	492	510	Right-handed alpha
Helix 79	AI7	H	523	526	Right-handed 310
Helix 80	AI8	H	527	536	Right-handed alpha
Helix 81	AI9	H	537	542	Right-handed 310
Helix 82	AJ1	H	547	557	Right-handed alpha
Helix 83	AJ2	H	568	599	Right-handed alpha
Helix 84	AJ3	H	605	630	Right-handed alpha
Helix 85	AJ4	H	639	660	Right-handed alpha
Helix 86	AJ5	H	674	685	Right-handed alpha
Helix 87	AJ6	I	488	509	Right-handed alpha
Helix 88	AJ7	I	523	526	Right-handed 310
Helix 89	AJ8	I	527	535	Right-handed alpha
Helix 90	AJ9	I	547	557	Right-handed alpha
Helix 91	AK1	I	559	563	Right-handed 310
Helix 92	AK2	I	565	589	Right-handed alpha
Helix 93	AK3	I	589	600	Right-handed alpha
Helix 94	AK4	I	605	629	Right-handed alpha
Helix 95	AK5	I	639	659	Right-handed alpha
Helix 96	AK6	J	492	509	Right-handed alpha
Helix 97	AK7	J	527	536	Right-handed alpha
Helix 98	AK8	J	547	557	Right-handed alpha
Helix 99	AK9	J	567	589	Right-handed alpha
Helix 100	AL1	J	589	600	Right-handed alpha
Helix 101	AL2	J	605	629	Right-handed alpha
Helix 102	AL3	J	630	632	Right-handed 310
Helix 103	AL4	J	641	666	Right-handed alpha
Helix 104	AL5	K	13	17	Right-handed 310
Helix 105	AL6	K	19	23	Right-handed 310
Helix 106	AL7	K	43	48	Right-handed alpha
Helix 107	AL8	K	49	50	Right-handed 310
Helix 108	AL9	K	51	55	Right-handed 310
Helix 109	AM1	K	110	115	Right-handed alpha
Helix 110	AM2	K	170	181	Right-handed alpha
Helix 111	AM3	K	193	211	Right-handed alpha
Helix 112	AM4	K	222	243	Right-handed alpha
Helix 113	AM5	K	254	268	Right-handed alpha
Helix 114	AM6	K	276	289	Right-handed alpha
Helix 115	AM7	K	295	305	Right-handed alpha
Helix 116	AM8	K	347	351	Right-handed 310
Helix 117	AM9	K	358	373	Right-handed alpha
Helix 118	AN1	L	51	58	Right-handed alpha
Helix 119	AN2	L	88	91	Right-handed 310
Helix 120	AN3	L	100	105	Right-handed alpha
Helix 121	AN4	L	106	110	Right-handed 310
Helix 122	AN5	L	192	200	Right-handed alpha
Helix 123	AN6	L	201	212	Right-handed alpha
Helix 124	AN7	M	37	42	Right-handed 310
Helix 125	AN8	M	49	58	Right-handed alpha
Helix 126	AN9	M	88	92	Right-handed alpha
Helix 127	AO1	M	100	105	Right-handed alpha
Helix 128	AO2	M	111	122	Right-handed alpha
Helix 129	AO3	M	124	136	Right-handed alpha
Helix 130	AO4	M	144	164	Right-handed alpha
Helix 131	AO5	M	192	200	Right-handed alpha
Helix 132	AO6	M	201	212	Right-handed alpha
Helix 133	AO7	M	267	271	Right-handed 310
Helix 134	AO8	N	311	386	Right-handed alpha
Helix 135	AO9	O	5	9	Right-handed 310
Helix 136	AP1	O	29	34	Right-handed 310
Helix 137	AP2	O	44	52	Right-handed alpha
Helix 138	AP3	O	69	77	Right-handed alpha
Helix 139	AP4	O	92	110	Right-handed alpha
Helix 140	AP5	O	123	138	Right-handed alpha
Helix 141	AP6	O	141	154	Right-handed alpha
Helix 142	AP7	O	159	168	Right-handed alpha
Helix 143	AP8	P	309	386	Right-handed alpha

There are 28 sheets in PDB entry 9H2J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	27	first strand
Strand 2	A	8	13	anti-parallel
Strand 3	B	266	269	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	127	first strand
Strand 2	A	132	137	anti-parallel
Strand 3	A	106	111	parallel
Strand 4	C	261	263	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	268	first strand
Strand 2	D	227	230	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	110	first strand
Strand 2	B	133	136	parallel
Strand 3	B	124	126	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	228	first strand
Strand 2	D	223	224	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	90	first strand
Strand 2	E	112	120	anti-parallel
Strand 3	E	186	191	anti-parallel
Strand 4	E	157	162	anti-parallel
Strand 5	E	150	153	anti-parallel
Strand 6	E	145	147	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	90	first strand
Strand 2	E	112	120	anti-parallel
Strand 3	E	222	224	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	171	173	first strand
Strand 2	K	322	325	parallel
Strand 3	K	330	333	anti-parallel
Strand 4	K	336	339	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	233	235	first strand
Strand 2	E	293	295	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	240	247	first strand
Strand 2	E	331	338	anti-parallel
Strand 3	E	320	326	anti-parallel
Strand 4	E	269	273	parallel
Strand 5	E	299	305	anti-parallel
Strand 6	E	355	357	parallel
Strand 7	E	387	389	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	404	405	first strand
Strand 2	E	437	445	parallel
Strand 3	E	426	433	anti-parallel
Strand 4	E	417	421	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	404	405	first strand
Strand 2	E	437	445	parallel
Strand 3	E	379	383	anti-parallel
Strand 4	E	371	374	anti-parallel
Strand 5	E	363	365	anti-parallel
Strand 6	E	393	395	parallel
Strand 7	K	381	383	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	412	413	first strand
Strand 2	E	448	449	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	59	64	first strand
Strand 2	F	76	81	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	95	96	first strand
Strand 2	F	238	240	anti-parallel
Strand 3	F	233	235	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	222	225	first strand
Strand 2	F	216	219	anti-parallel
Strand 3	F	301	304	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	62	66	first strand
Strand 2	G	74	78	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	93	96	first strand
Strand 2	G	238	240	anti-parallel
Strand 3	G	233	235	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	176	179	first strand
Strand 2	G	301	304	anti-parallel
Strand 3	G	216	219	parallel
Strand 4	G	222	225	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	60	65	first strand
Strand 2	K	36	41	parallel
Strand 3	K	84	88	parallel
Strand 4	K	102	106	parallel
Strand 5	K	7	11	parallel
Strand 6	K	119	121	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	78	79	first strand
Strand 2	K	96	97	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	130	131	first strand
Strand 2	K	216	219	parallel
Strand 3	K	183	187	parallel
Strand 4	K	164	167	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	59	61	first strand
Strand 2	L	79	81	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	93	96	first strand
Strand 2	L	238	240	anti-parallel
Strand 3	L	233	235	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	59	65	first strand
Strand 2	M	75	81	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	93	96	first strand
Strand 2	M	238	240	anti-parallel
Strand 3	M	233	235	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	223	225	first strand
Strand 2	M	216	219	anti-parallel
Strand 3	M	301	304	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	12	15	first strand
Strand 2	O	21	25	anti-parallel
Strand 3	O	114	119	parallel
Strand 4	O	55	60	parallel
Strand 5	O	79	82	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9H2J

Analysis of interatomic Contacts of Structural Units in PDB entry:
9H2J