Analysis of interatomic Contacts of Structural Units in PDB entry:
9H38

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9H38 entry

There are 11 chains in PDB entry 9H38 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 40	GLY 179
B	THR 43	GLY 179
C	THR 43	GLY 179
D	THR 43	GLY 179
E	THR 43	GLY 179
F	THR 43	GLY 179
G	THR 43	GLY 179
H	THR 43	GLY 179
I	THR 43	GLY 179
J	VAL 40	GLY 179
K	GLY 41	TYR 47

There are no helices in PDB entry 9H38

There are 63 sheets in PDB entry 9H38. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8, AG9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	71	first strand
Strand 2	A	45	50	anti-parallel
Strand 3	A	171	179	anti-parallel
Strand 4	A	90	99	anti-parallel
Strand 5	A	128	137	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	56	first strand
Strand 2	A	156	157	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	77	first strand
Strand 2	A	84	86	anti-parallel
Strand 3	A	142	148	anti-parallel
Strand 4	A	104	110	anti-parallel
Strand 5	A	113	122	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	71	first strand
Strand 2	B	45	50	anti-parallel
Strand 3	B	171	179	anti-parallel
Strand 4	B	90	98	anti-parallel
Strand 5	B	129	137	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	56	first strand
Strand 2	B	156	157	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	77	first strand
Strand 2	B	84	86	anti-parallel
Strand 3	B	142	148	anti-parallel
Strand 4	B	104	110	anti-parallel
Strand 5	B	113	122	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	71	first strand
Strand 2	C	45	50	anti-parallel
Strand 3	C	171	179	anti-parallel
Strand 4	C	90	99	anti-parallel
Strand 5	C	128	137	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	55	56	first strand
Strand 2	C	156	157	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	77	first strand
Strand 2	C	84	86	anti-parallel
Strand 3	C	142	147	anti-parallel
Strand 4	C	104	110	anti-parallel
Strand 5	C	113	122	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	71	first strand
Strand 2	D	45	50	anti-parallel
Strand 3	D	171	179	anti-parallel
Strand 4	D	90	99	anti-parallel
Strand 5	D	128	137	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	55	56	first strand
Strand 2	D	156	157	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	77	first strand
Strand 2	D	84	86	anti-parallel
Strand 3	D	142	147	anti-parallel
Strand 4	D	105	110	anti-parallel
Strand 5	D	113	121	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	71	first strand
Strand 2	E	45	50	anti-parallel
Strand 3	E	171	179	anti-parallel
Strand 4	E	90	99	anti-parallel
Strand 5	E	128	137	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	55	56	first strand
Strand 2	E	156	157	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	75	77	first strand
Strand 2	E	84	86	anti-parallel
Strand 3	E	142	148	anti-parallel
Strand 4	E	104	110	anti-parallel
Strand 5	E	113	122	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	66	71	first strand
Strand 2	F	45	50	anti-parallel
Strand 3	F	171	177	anti-parallel
Strand 4	F	90	99	anti-parallel
Strand 5	F	128	137	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	55	56	first strand
Strand 2	F	156	157	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	75	76	first strand
Strand 2	F	84	86	anti-parallel
Strand 3	F	142	148	anti-parallel
Strand 4	F	105	110	anti-parallel
Strand 5	F	113	121	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	66	71	first strand
Strand 2	G	45	50	anti-parallel
Strand 3	G	171	179	anti-parallel
Strand 4	G	90	99	anti-parallel
Strand 5	G	128	137	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	55	56	first strand
Strand 2	G	156	157	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	75	77	first strand
Strand 2	G	84	86	anti-parallel
Strand 3	G	142	148	anti-parallel
Strand 4	G	104	110	anti-parallel
Strand 5	G	113	122	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	66	71	first strand
Strand 2	H	45	50	anti-parallel
Strand 3	H	171	179	anti-parallel
Strand 4	H	90	98	anti-parallel
Strand 5	H	129	137	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	55	56	first strand
Strand 2	H	156	157	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	75	77	first strand
Strand 2	H	84	86	anti-parallel
Strand 3	H	142	148	anti-parallel
Strand 4	H	104	110	anti-parallel
Strand 5	H	113	122	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	66	71	first strand
Strand 2	I	45	50	anti-parallel
Strand 3	I	171	179	anti-parallel
Strand 4	I	90	99	anti-parallel
Strand 5	I	128	137	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	55	56	first strand
Strand 2	I	156	157	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	75	76	first strand
Strand 2	I	84	86	anti-parallel
Strand 3	I	142	148	anti-parallel
Strand 4	I	104	110	anti-parallel
Strand 5	I	113	122	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	66	71	first strand
Strand 2	J	45	50	anti-parallel
Strand 3	J	171	179	anti-parallel
Strand 4	J	90	99	anti-parallel
Strand 5	J	128	137	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	55	56	first strand
Strand 2	J	156	157	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	75	77	first strand
Strand 2	J	84	86	anti-parallel
Strand 3	J	142	148	anti-parallel
Strand 4	J	104	110	anti-parallel
Strand 5	J	113	122	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	66	71	first strand
Strand 2	K	45	50	anti-parallel
Strand 3	K	171	179	anti-parallel
Strand 4	K	90	98	anti-parallel
Strand 5	K	129	137	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	55	56	first strand
Strand 2	K	156	157	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	75	76	first strand
Strand 2	K	84	86	anti-parallel
Strand 3	K	142	148	anti-parallel
Strand 4	K	104	110	anti-parallel
Strand 5	K	113	122	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	66	71	first strand
Strand 2	L	45	50	anti-parallel
Strand 3	L	171	177	anti-parallel
Strand 4	L	90	99	anti-parallel
Strand 5	L	128	137	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	55	56	first strand
Strand 2	L	156	157	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	75	77	first strand
Strand 2	L	84	86	anti-parallel
Strand 3	L	142	148	anti-parallel
Strand 4	L	104	110	anti-parallel
Strand 5	L	113	122	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	66	71	first strand
Strand 2	M	45	50	anti-parallel
Strand 3	M	171	178	anti-parallel
Strand 4	M	90	99	anti-parallel
Strand 5	M	128	137	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	55	56	first strand
Strand 2	M	156	157	anti-parallel

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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	75	77	first strand
Strand 2	M	84	86	anti-parallel
Strand 3	M	142	148	anti-parallel
Strand 4	M	104	110	anti-parallel
Strand 5	M	113	122	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	66	71	first strand
Strand 2	N	45	50	anti-parallel
Strand 3	N	171	179	anti-parallel
Strand 4	N	90	98	anti-parallel
Strand 5	N	129	137	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	55	56	first strand
Strand 2	N	156	157	anti-parallel

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There are 5 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	75	76	first strand
Strand 2	N	84	86	anti-parallel
Strand 3	N	142	147	anti-parallel
Strand 4	N	104	110	anti-parallel
Strand 5	N	113	122	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	66	71	first strand
Strand 2	O	45	50	anti-parallel
Strand 3	O	171	177	anti-parallel
Strand 4	O	90	99	anti-parallel
Strand 5	O	128	137	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	55	56	first strand
Strand 2	O	156	157	anti-parallel

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There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	75	76	first strand
Strand 2	O	84	86	anti-parallel
Strand 3	O	142	148	anti-parallel
Strand 4	O	105	110	anti-parallel
Strand 5	O	113	121	anti-parallel

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There are 5 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	66	71	first strand
Strand 2	P	45	50	anti-parallel
Strand 3	P	171	179	anti-parallel
Strand 4	P	90	98	anti-parallel
Strand 5	P	129	137	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	55	56	first strand
Strand 2	P	156	157	anti-parallel

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There are 5 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	75	77	first strand
Strand 2	P	84	86	anti-parallel
Strand 3	P	142	148	anti-parallel
Strand 4	P	104	110	anti-parallel
Strand 5	P	113	122	anti-parallel

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There are 5 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	66	71	first strand
Strand 2	Q	45	50	anti-parallel
Strand 3	Q	171	179	anti-parallel
Strand 4	Q	90	98	anti-parallel
Strand 5	Q	129	137	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	55	56	first strand
Strand 2	Q	156	157	anti-parallel

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There are 5 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	75	76	first strand
Strand 2	Q	84	86	anti-parallel
Strand 3	Q	142	148	anti-parallel
Strand 4	Q	104	110	anti-parallel
Strand 5	Q	113	122	anti-parallel

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There are 5 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	66	71	first strand
Strand 2	R	45	50	anti-parallel
Strand 3	R	171	177	anti-parallel
Strand 4	R	90	98	anti-parallel
Strand 5	R	129	137	anti-parallel

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There are 2 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	55	56	first strand
Strand 2	R	156	157	anti-parallel

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There are 5 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	75	77	first strand
Strand 2	R	84	86	anti-parallel
Strand 3	R	142	148	anti-parallel
Strand 4	R	104	110	anti-parallel
Strand 5	R	113	122	anti-parallel

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There are 5 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	66	71	first strand
Strand 2	S	45	50	anti-parallel
Strand 3	S	171	179	anti-parallel
Strand 4	S	90	99	anti-parallel
Strand 5	S	128	137	anti-parallel

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There are 2 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	55	56	first strand
Strand 2	S	156	157	anti-parallel

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There are 5 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	75	77	first strand
Strand 2	S	84	86	anti-parallel
Strand 3	S	142	148	anti-parallel
Strand 4	S	105	110	anti-parallel
Strand 5	S	113	121	anti-parallel

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There are 5 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	66	71	first strand
Strand 2	T	45	50	anti-parallel
Strand 3	T	171	179	anti-parallel
Strand 4	T	90	99	anti-parallel
Strand 5	T	128	137	anti-parallel

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There are 2 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	55	56	first strand
Strand 2	T	156	157	anti-parallel

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There are 5 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	75	77	first strand
Strand 2	T	84	86	anti-parallel
Strand 3	T	142	148	anti-parallel
Strand 4	T	104	110	anti-parallel
Strand 5	T	113	122	anti-parallel

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There are 5 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	66	71	first strand
Strand 2	U	45	50	anti-parallel
Strand 3	U	171	179	anti-parallel
Strand 4	U	90	99	anti-parallel
Strand 5	U	128	137	anti-parallel

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There are 2 strands in AG8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	55	57	first strand
Strand 2	U	155	157	anti-parallel

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There are 5 strands in AG9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	75	77	first strand
Strand 2	U	84	86	anti-parallel
Strand 3	U	142	148	anti-parallel
Strand 4	U	104	110	anti-parallel
Strand 5	U	113	122	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9H38

Analysis of interatomic Contacts of Structural Units in PDB entry:
9H38