Analysis of interatomic Contacts of Structural Units in PDB entry:
9H48


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H48 entry

There is 1 chain in PDB entry 9H48 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 70LYS 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 9H48. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
112 115Right-handed 310
Helix 2
AA2
A
130 136Right-handed alpha
Helix 3
AA3
A
136 148Right-handed alpha
Helix 4
AA4
A
184 199Right-handed alpha
Helix 5
AA5
A
214 220Right-handed alpha
Helix 6
AA6
A
247 260Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9H48.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 110first strand
Strand 2
A
85 89anti-parallel
Strand 3
A
205 210anti-parallel
Strand 4
A
152 157parallel
Strand 5
A
121 126parallel
Strand 6
A
226 231anti-parallel
Strand 7
A
234 238anti-parallel
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