Analysis of interatomic Contacts of Structural Units in PDB entry:
9H4E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H4E entry

There are 4 chains in PDB entry 9H4E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 59PRO 489
A
 GLY 59PRO 489
C
 THR 60PRO 489
D
 ILE 57ALA 493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 87 helices in PDB entry 9H4E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
60 68Right-handed alpha
Helix 2
AA2
B
68 90Right-handed alpha
Helix 3
AA3
B
94 104Right-handed alpha
Helix 4
AA4
B
126 135Right-handed alpha
Helix 5
AA5
B
140 145Right-handed 310
Helix 6
AA6
B
150 188Right-handed alpha
Helix 7
AA7
B
207 233Right-handed alpha
Helix 8
AA8
B
244 249Right-handed 310
Helix 9
AA9
B
250 262Right-handed alpha
Helix 10
AB1
B
275 303Right-handed alpha
Helix 11
AB2
B
333 354Right-handed alpha
Helix 12
AB3
B
361 392Right-handed alpha
Helix 13
AB4
B
396 405Right-handed alpha
Helix 14
AB5
B
409 411Right-handed 310
Helix 15
AB6
B
412 425Right-handed alpha
Helix 16
AB7
B
425 444Right-handed alpha
Helix 17
AB8
B
446 453Right-handed alpha
Helix 18
AB9
B
454 461Right-handed alpha
Helix 19
AC1
B
462 471Right-handed alpha
Helix 20
AC2
B
472 475Right-handed 310
Helix 21
AC3
B
478 488Right-handed alpha
Helix 22
AC4
A
60 67Right-handed alpha
Helix 23
AC5
A
68 90Right-handed alpha
Helix 24
AC6
A
94 104Right-handed alpha
Helix 25
AC7
A
106 110Right-handed 310
Helix 26
AC8
A
126 135Right-handed alpha
Helix 27
AC9
A
137 145Right-handed 310
Helix 28
AD1
A
150 188Right-handed alpha
Helix 29
AD2
A
207 233Right-handed alpha
Helix 30
AD3
A
244 249Right-handed 310
Helix 31
AD4
A
250 262Right-handed alpha
Helix 32
AD5
A
275 303Right-handed alpha
Helix 33
AD6
A
333 354Right-handed alpha
Helix 34
AD7
A
361 392Right-handed alpha
Helix 35
AD8
A
396 405Right-handed alpha
Helix 36
AD9
A
409 411Right-handed 310
Helix 37
AE1
A
412 420Right-handed alpha
Helix 38
AE2
A
420 425Right-handed alpha
Helix 39
AE3
A
425 443Right-handed alpha
Helix 40
AE4
A
446 453Right-handed alpha
Helix 41
AE5
A
454 461Right-handed alpha
Helix 42
AE6
A
462 471Right-handed alpha
Helix 43
AE7
A
472 475Right-handed 310
Helix 44
AE8
A
478 488Right-handed alpha
Helix 45
AE9
C
61 67Right-handed alpha
Helix 46
AF1
C
68 90Right-handed alpha
Helix 47
AF2
C
94 104Right-handed alpha
Helix 48
AF3
C
126 135Right-handed alpha
Helix 49
AF4
C
150 188Right-handed alpha
Helix 50
AF5
C
207 233Right-handed alpha
Helix 51
AF6
C
244 249Right-handed 310
Helix 52
AF7
C
250 262Right-handed alpha
Helix 53
AF8
C
275 303Right-handed alpha
Helix 54
AF9
C
333 354Right-handed alpha
Helix 55
AG1
C
361 392Right-handed alpha
Helix 56
AG2
C
396 405Right-handed alpha
Helix 57
AG3
C
409 411Right-handed 310
Helix 58
AG4
C
412 421Right-handed alpha
Helix 59
AG5
C
425 443Right-handed alpha
Helix 60
AG6
C
446 452Right-handed alpha
Helix 61
AG7
C
454 461Right-handed alpha
Helix 62
AG8
C
463 471Right-handed alpha
Helix 63
AG9
C
472 475Right-handed 310
Helix 64
AH1
C
478 488Right-handed alpha
Helix 65
AH2
D
60 67Right-handed alpha
Helix 66
AH3
D
68 90Right-handed alpha
Helix 67
AH4
D
94 104Right-handed alpha
Helix 68
AH5
D
106 110Right-handed 310
Helix 69
AH6
D
111 117Right-handed alpha
Helix 70
AH7
D
126 135Right-handed alpha
Helix 71
AH8
D
136 145Right-handed 310
Helix 72
AH9
D
150 188Right-handed alpha
Helix 73
AI1
D
207 233Right-handed alpha
Helix 74
AI2
D
244 249Right-handed 310
Helix 75
AI3
D
250 262Right-handed alpha
Helix 76
AI4
D
275 303Right-handed alpha
Helix 77
AI5
D
333 354Right-handed alpha
Helix 78
AI6
D
361 392Right-handed alpha
Helix 79
AI7
D
396 405Right-handed alpha
Helix 80
AI8
D
409 411Right-handed 310
Helix 81
AI9
D
412 425Right-handed alpha
Helix 82
AJ1
D
425 444Right-handed alpha
Helix 83
AJ2
D
446 453Right-handed alpha
Helix 84
AJ3
D
454 461Right-handed alpha
Helix 85
AJ4
D
462 470Right-handed alpha
Helix 86
AJ5
D
471 475Right-handed 310
Helix 87
AJ6
D
478 488Right-handed alpha
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There are 8 sheets in PDB entry 9H4E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 197first strand
Strand 2
B
200 206anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
310 311first strand
Strand 2
B
394 395anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 197first strand
Strand 2
A
200 206anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 311first strand
Strand 2
A
394 395anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
192 197first strand
Strand 2
C
200 206anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
310 311first strand
Strand 2
C
394 395anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
192 197first strand
Strand 2
D
200 206anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
310 311first strand
Strand 2
D
394 395anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il