Analysis of interatomic Contacts of Structural Units in PDB entry:
9H4G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H4G entry

There are 4 chains in PDB entry 9H4G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 59SER 488
B
 GLY 59PRO 489
C
 GLY 59PRO 489
D
 GLY 59PRO 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 9H4G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 67Right-handed alpha
Helix 2
AA2
A
68 90Right-handed alpha
Helix 3
AA3
A
94 102Right-handed alpha
Helix 4
AA4
A
103 105Right-handed 310
Helix 5
AA5
A
106 110Right-handed 310
Helix 6
AA6
A
126 135Right-handed alpha
Helix 7
AA7
A
137 145Right-handed 310
Helix 8
AA8
A
150 188Right-handed alpha
Helix 9
AA9
A
207 233Right-handed alpha
Helix 10
AB1
A
244 248Right-handed 310
Helix 11
AB2
A
249 262Right-handed alpha
Helix 12
AB3
A
275 303Right-handed alpha
Helix 13
AB4
A
333 354Right-handed alpha
Helix 14
AB5
A
363 392Right-handed alpha
Helix 15
AB6
A
396 405Right-handed alpha
Helix 16
AB7
A
406 408Right-handed 310
Helix 17
AB8
A
409 411Right-handed 310
Helix 18
AB9
A
412 421Right-handed alpha
Helix 19
AC1
A
425 443Right-handed alpha
Helix 20
AC2
A
446 453Right-handed alpha
Helix 21
AC3
A
454 461Right-handed alpha
Helix 22
AC4
A
462 470Right-handed alpha
Helix 23
AC5
A
471 475Right-handed 310
Helix 24
AC6
A
478 488Right-handed alpha
Helix 25
AC7
B
60 67Right-handed alpha
Helix 26
AC8
B
68 90Right-handed alpha
Helix 27
AC9
B
94 104Right-handed alpha
Helix 28
AD1
B
105 110Right-handed 310
Helix 29
AD2
B
126 135Right-handed alpha
Helix 30
AD3
B
137 145Right-handed 310
Helix 31
AD4
B
150 188Right-handed alpha
Helix 32
AD5
B
207 233Right-handed alpha
Helix 33
AD6
B
247 249Right-handed 310
Helix 34
AD7
B
250 262Right-handed alpha
Helix 35
AD8
B
275 303Right-handed alpha
Helix 36
AD9
B
333 354Right-handed alpha
Helix 37
AE1
B
361 392Right-handed alpha
Helix 38
AE2
B
396 405Right-handed alpha
Helix 39
AE3
B
406 408Right-handed 310
Helix 40
AE4
B
409 411Right-handed 310
Helix 41
AE5
B
412 421Right-handed alpha
Helix 42
AE6
B
425 443Right-handed alpha
Helix 43
AE7
B
446 454Right-handed alpha
Helix 44
AE8
B
454 461Right-handed alpha
Helix 45
AE9
B
462 471Right-handed alpha
Helix 46
AF1
B
472 476Right-handed 310
Helix 47
AF2
B
478 488Right-handed alpha
Helix 48
AF3
C
60 67Right-handed alpha
Helix 49
AF4
C
68 90Right-handed alpha
Helix 50
AF5
C
94 104Right-handed alpha
Helix 51
AF6
C
106 110Right-handed 310
Helix 52
AF7
C
126 135Right-handed alpha
Helix 53
AF8
C
137 145Right-handed 310
Helix 54
AF9
C
150 188Right-handed alpha
Helix 55
AG1
C
207 233Right-handed alpha
Helix 56
AG2
C
247 249Right-handed 310
Helix 57
AG3
C
250 262Right-handed alpha
Helix 58
AG4
C
275 303Right-handed alpha
Helix 59
AG5
C
333 353Right-handed alpha
Helix 60
AG6
C
363 392Right-handed alpha
Helix 61
AG7
C
396 405Right-handed alpha
Helix 62
AG8
C
406 408Right-handed 310
Helix 63
AG9
C
409 411Right-handed 310
Helix 64
AH1
C
412 424Right-handed alpha
Helix 65
AH2
C
425 443Right-handed alpha
Helix 66
AH3
C
446 453Right-handed alpha
Helix 67
AH4
C
454 461Right-handed alpha
Helix 68
AH5
C
462 470Right-handed alpha
Helix 69
AH6
C
471 475Right-handed 310
Helix 70
AH7
C
479 488Right-handed alpha
Helix 71
AH8
D
60 67Right-handed alpha
Helix 72
AH9
D
68 90Right-handed alpha
Helix 73
AI1
D
94 104Right-handed alpha
Helix 74
AI2
D
105 110Right-handed 310
Helix 75
AI3
D
126 135Right-handed alpha
Helix 76
AI4
D
137 145Right-handed 310
Helix 77
AI5
D
150 188Right-handed alpha
Helix 78
AI6
D
207 233Right-handed alpha
Helix 79
AI7
D
247 249Right-handed 310
Helix 80
AI8
D
250 262Right-handed alpha
Helix 81
AI9
D
275 303Right-handed alpha
Helix 82
AJ1
D
333 354Right-handed alpha
Helix 83
AJ2
D
363 392Right-handed alpha
Helix 84
AJ3
D
396 406Right-handed alpha
Helix 85
AJ4
D
407 408Right-handed 310
Helix 86
AJ5
D
409 411Right-handed 310
Helix 87
AJ6
D
412 424Right-handed alpha
Helix 88
AJ7
D
425 443Right-handed alpha
Helix 89
AJ8
D
446 454Right-handed alpha
Helix 90
AJ9
D
454 461Right-handed alpha
Helix 91
AK1
D
462 470Right-handed alpha
Helix 92
AK2
D
471 475Right-handed 310
Helix 93
AK3
D
478 488Right-handed alpha
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There are 8 sheets in PDB entry 9H4G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 197first strand
Strand 2
A
200 206anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 311first strand
Strand 2
A
394 395anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 197first strand
Strand 2
B
200 206anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
310 311first strand
Strand 2
B
394 395anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
192 197first strand
Strand 2
C
200 206anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
310 311first strand
Strand 2
C
394 395anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
192 197first strand
Strand 2
D
200 206anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
310 311first strand
Strand 2
D
394 395anti-parallel
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