Analysis of interatomic Contacts of Structural Units in PDB entry:
9H4H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H4H entry

There are 2 chains in PDB entry 9H4H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 51PRO 489
B
 THR 51PRO 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 9H4H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 68Right-handed alpha
Helix 2
AA2
A
68 90Right-handed alpha
Helix 3
AA3
A
94 104Right-handed alpha
Helix 4
AA4
A
105 110Right-handed 310
Helix 5
AA5
A
111 123Right-handed alpha
Helix 6
AA6
A
126 137Right-handed alpha
Helix 7
AA7
A
138 145Right-handed 310
Helix 8
AA8
A
150 188Right-handed alpha
Helix 9
AA9
A
207 233Right-handed alpha
Helix 10
AB1
A
244 249Right-handed 310
Helix 11
AB2
A
250 263Right-handed alpha
Helix 12
AB3
A
275 303Right-handed alpha
Helix 13
AB4
A
330 354Right-handed alpha
Helix 14
AB5
A
363 392Right-handed alpha
Helix 15
AB6
A
396 405Right-handed alpha
Helix 16
AB7
A
409 411Right-handed 310
Helix 17
AB8
A
412 425Right-handed alpha
Helix 18
AB9
A
425 444Right-handed alpha
Helix 19
AC1
A
446 453Right-handed alpha
Helix 20
AC2
A
454 459Right-handed alpha
Helix 21
AC3
A
462 470Right-handed alpha
Helix 22
AC4
A
471 475Right-handed 310
Helix 23
AC5
A
478 488Right-handed alpha
Helix 24
AC6
B
60 68Right-handed alpha
Helix 25
AC7
B
68 90Right-handed alpha
Helix 26
AC8
B
94 104Right-handed alpha
Helix 27
AC9
B
105 110Right-handed 310
Helix 28
AD1
B
111 123Right-handed alpha
Helix 29
AD2
B
126 137Right-handed alpha
Helix 30
AD3
B
140 145Right-handed 310
Helix 31
AD4
B
150 188Right-handed alpha
Helix 32
AD5
B
207 233Right-handed alpha
Helix 33
AD6
B
244 249Right-handed 310
Helix 34
AD7
B
250 262Right-handed alpha
Helix 35
AD8
B
275 303Right-handed alpha
Helix 36
AD9
B
330 354Right-handed alpha
Helix 37
AE1
B
363 392Right-handed alpha
Helix 38
AE2
B
396 405Right-handed alpha
Helix 39
AE3
B
409 411Right-handed 310
Helix 40
AE4
B
412 425Right-handed alpha
Helix 41
AE5
B
425 444Right-handed alpha
Helix 42
AE6
B
446 453Right-handed alpha
Helix 43
AE7
B
454 459Right-handed alpha
Helix 44
AE8
B
462 470Right-handed alpha
Helix 45
AE9
B
471 475Right-handed 310
Helix 46
AF1
B
478 488Right-handed alpha
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There are 4 sheets in PDB entry 9H4H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 197first strand
Strand 2
A
200 206anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 311first strand
Strand 2
A
394 395anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 197first strand
Strand 2
B
200 206anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
310 311first strand
Strand 2
B
394 395anti-parallel
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