Analysis of interatomic Contacts of Structural Units in PDB entry:
9H4X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H4X entry

There is 1 chain in PDB entry 9H4X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU -6ILE 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9H4X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
33 44Right-handed alpha
Helix 3
AA3
A
55 61Right-handed alpha
Helix 4
AA4
A
61 72Right-handed alpha
Helix 5
AA5
A
92 103Right-handed alpha
Helix 6
AA6
A
115 129Right-handed alpha
Helix 7
AA7
A
173 178Right-handed alpha
Helix 8
AA8
A
180 193Right-handed alpha
Helix 9
AA9
A
193 207Right-handed alpha
Helix 10
AB1
A
213 230Right-handed alpha
Helix 11
AB2
A
230 237Right-handed alpha
Helix 12
AB3
A
238 260Right-handed alpha
Helix 13
AB4
A
267 284Right-handed alpha
Helix 14
AB5
A
289 309Right-handed alpha
Helix 15
AB6
A
310 316Right-handed 310
Helix 16
AB7
A
318 330Right-handed alpha
Helix 17
AB8
A
334 346Right-handed alpha
Helix 18
AB9
A
357 368Right-handed alpha
Helix 19
AC1
A
369 372Right-handed 310
Helix 20
AC2
A
376 383Right-handed alpha
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There are 2 sheets in PDB entry 9H4X. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
168 172parallel
Strand 3
A
133 137parallel
Strand 4
A
109 114parallel
Strand 5
A
48 54parallel
Strand 6
A
75 81parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 154first strand
Strand 2
A
157 162anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il