Analysis of interatomic Contacts of Structural Units in PDB entry:
9H5P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9H5P entry

There are 2 chains in PDB entry 9H5P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 6	GLY 452
B	GLN 5	GLY 452

There are 42 helices in PDB entry 9H5P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	28	Right-handed alpha
Helix 2	AA2	A	65	75	Right-handed alpha
Helix 3	AA3	A	102	107	Right-handed 310
Helix 4	AA4	A	108	128	Right-handed alpha
Helix 5	AA5	A	133	137	Right-handed 310
Helix 6	AA6	A	139	145	Right-handed alpha
Helix 7	AA7	A	147	155	Right-handed alpha
Helix 8	AA8	A	158	174	Right-handed alpha
Helix 9	AA9	A	181	193	Right-handed alpha
Helix 10	AB1	A	194	200	Right-handed alpha
Helix 11	AB2	A	214	223	Right-handed alpha
Helix 12	AB3	A	265	270	Right-handed alpha
Helix 13	AB4	A	279	288	Right-handed alpha
Helix 14	AB5	A	306	309	Right-handed 310
Helix 15	AB6	A	344	352	Right-handed alpha
Helix 16	AB7	A	354	368	Right-handed alpha
Helix 17	AB8	A	371	376	Right-handed 310
Helix 18	AB9	A	402	407	Right-handed alpha
Helix 19	AC1	A	408	411	Right-handed 310
Helix 20	AC2	A	422	426	Right-handed 310
Helix 21	AC3	A	432	452	Right-handed alpha
Helix 22	AC4	B	14	26	Right-handed alpha
Helix 23	AC5	B	65	76	Right-handed alpha
Helix 24	AC6	B	102	107	Right-handed 310
Helix 25	AC7	B	108	128	Right-handed alpha
Helix 26	AC8	B	133	137	Right-handed 310
Helix 27	AC9	B	139	145	Right-handed alpha
Helix 28	AD1	B	147	156	Right-handed alpha
Helix 29	AD2	B	158	174	Right-handed alpha
Helix 30	AD3	B	181	193	Right-handed alpha
Helix 31	AD4	B	194	200	Right-handed alpha
Helix 32	AD5	B	213	223	Right-handed alpha
Helix 33	AD6	B	265	271	Right-handed alpha
Helix 34	AD7	B	279	288	Right-handed alpha
Helix 35	AD8	B	304	308	Right-handed 310
Helix 36	AD9	B	344	352	Right-handed alpha
Helix 37	AE1	B	354	368	Right-handed alpha
Helix 38	AE2	B	371	376	Right-handed 310
Helix 39	AE3	B	402	407	Right-handed alpha
Helix 40	AE4	B	408	411	Right-handed 310
Helix 41	AE5	B	422	426	Right-handed 310
Helix 42	AE6	B	432	452	Right-handed alpha

There are 12 sheets in PDB entry 9H5P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	231	first strand
Strand 2	A	31	34	parallel
Strand 3	A	8	11	parallel
Strand 4	A	259	262	parallel
Strand 5	A	418	420	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	49	first strand
Strand 2	A	52	55	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	61	first strand
Strand 2	A	208	210	anti-parallel
Strand 3	A	79	81	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	100	first strand
Strand 2	A	87	90	anti-parallel
Strand 3	A	311	316	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	254	257	first strand
Strand 2	A	245	250	anti-parallel
Strand 3	A	236	242	anti-parallel
Strand 4	A	273	275	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	327	first strand
Strand 2	A	336	343	anti-parallel
Strand 3	A	294	301	anti-parallel
Strand 4	A	379	384	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	230	231	first strand
Strand 2	B	31	34	parallel
Strand 3	B	6	11	parallel
Strand 4	B	253	262	parallel
Strand 5	B	245	250	anti-parallel
Strand 6	B	238	242	anti-parallel
Strand 7	B	273	275	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	230	231	first strand
Strand 2	B	31	34	parallel
Strand 3	B	6	11	parallel
Strand 4	B	253	262	parallel
Strand 5	B	418	420	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	49	first strand
Strand 2	B	52	55	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	61	first strand
Strand 2	B	208	210	anti-parallel
Strand 3	B	79	81	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	100	first strand
Strand 2	B	87	90	anti-parallel
Strand 3	B	311	316	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	327	first strand
Strand 2	B	336	343	anti-parallel
Strand 3	B	294	301	anti-parallel
Strand 4	B	379	384	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9H5P

Analysis of interatomic Contacts of Structural Units in PDB entry:
9H5P