Analysis of interatomic Contacts of Structural Units in PDB entry:
9H76


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H76 entry

There are 2 chains in PDB entry 9H76 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3GLY 432
B
 VAL 4SER 119
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9H76. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 18Right-handed alpha
Helix 2
AA2
A
20 25Right-handed alpha
Helix 3
AA3
A
25 33Right-handed alpha
Helix 4
AA4
A
35 64Right-handed alpha
Helix 5
AA5
A
69 78Right-handed alpha
Helix 6
AA6
A
79 93Right-handed alpha
Helix 7
AA7
A
93 115Right-handed alpha
Helix 8
AA8
A
117 119Right-handed 310
Helix 9
AA9
A
120 137Right-handed alpha
Helix 10
AB1
A
139 154Right-handed alpha
Helix 11
AB2
A
154 167Right-handed alpha
Helix 12
AB3
A
172 177Right-handed 310
Helix 13
AB4
A
185 201Right-handed alpha
Helix 14
AB5
A
202 204Right-handed 310
Helix 15
AB6
A
205 214Right-handed alpha
Helix 16
AB7
A
219 247Right-handed alpha
Helix 17
AB8
A
248 254Right-handed alpha
Helix 18
AB9
A
257 267Right-handed alpha
Helix 19
AC1
A
269 304Right-handed alpha
Helix 20
AC2
A
309 315Right-handed alpha
Helix 21
AC3
A
324 340Right-handed alpha
Helix 22
AC4
A
342 372Right-handed alpha
Helix 23
AC5
A
386 406Right-handed alpha
Helix 24
AC6
A
406 431Right-handed alpha
Helix 25
AC7
B
30 34Right-handed 310
Helix 26
AC8
B
88 92Right-handed 310
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There are 4 sheets in PDB entry 9H76. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 8first strand
Strand 2
B
24 27anti-parallel
Strand 3
B
79 84anti-parallel
Strand 4
B
20 21anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 8first strand
Strand 2
B
24 27anti-parallel
Strand 3
B
79 84anti-parallel
Strand 4
B
69 74anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 14first strand
Strand 2
B
113 117parallel
Strand 3
B
93 100anti-parallel
Strand 4
B
35 41anti-parallel
Strand 5
B
48 53anti-parallel
Strand 6
B
59 61anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 14first strand
Strand 2
B
113 117parallel
Strand 3
B
93 100anti-parallel
Strand 4
B
108 109anti-parallel
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