Analysis of interatomic Contacts of Structural Units in PDB entry:
9H7Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H7Y entry

There are 2 chains in PDB entry 9H7Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -2CYS 239
B
 LYS 28LEU 632
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9H7Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 3Right-handed 310
Helix 2
AA2
A
44 54Right-handed alpha
Helix 3
AA3
A
73 75Right-handed 310
Helix 4
AA4
A
76 82Right-handed alpha
Helix 5
AA5
A
99 104Right-handed alpha
Helix 6
AA6
A
109 114Right-handed alpha
Helix 7
AA7
A
115 130Right-handed alpha
Helix 8
AA8
A
133 138Right-handed alpha
Helix 9
AA9
A
147 163Right-handed alpha
Helix 10
AB1
A
180 195Right-handed alpha
Helix 11
AB2
A
204 209Right-handed alpha
Helix 12
AB3
A
227 238Right-handed alpha
Helix 13
AB4
B
603 612Right-handed alpha
Helix 14
AB5
B
616 629Right-handed alpha
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There are 4 sheets in PDB entry 9H7Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 30first strand
Strand 2
A
5 16anti-parallel
Strand 3
A
60 67anti-parallel
Strand 4
A
70 71anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
166 170parallel
Strand 3
A
197 201parallel
Strand 4
A
34 38parallel
Strand 5
A
213 218parallel
Strand 6
A
221 226anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 42first strand
Strand 2
B
31 35anti-parallel
Strand 3
B
75 80parallel
Strand 4
B
101 110parallel
Strand 5
B
131 140parallel
Strand 6
B
477 486parallel
Strand 7
B
505 514parallel
Strand 8
B
534 543parallel
Strand 9
B
563 572parallel
Strand 10
B
592 600parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 54first strand
Strand 2
B
58 65anti-parallel
Strand 3
B
87 96parallel
Strand 4
B
114 126parallel
Strand 5
B
145 156parallel
Strand 6
B
491 500parallel
Strand 7
B
519 528parallel
Strand 8
B
548 557parallel
Strand 9
B
577 586parallel
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