Analysis of interatomic Contacts of Structural Units in PDB entry:
9H7Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9H7Z entry

There are 2 chains in PDB entry 9H7Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 3	GLN 583
M	ASN 2	ASN 89

There are 56 helices in PDB entry 9H7Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	8	Right-handed alpha
Helix 2	AA2	A	11	15	Right-handed 310
Helix 3	AA3	A	28	40	Right-handed alpha
Helix 4	AA4	A	59	64	Right-handed alpha
Helix 5	AA5	A	65	68	Right-handed 310
Helix 6	AA6	A	101	106	Right-handed 310
Helix 7	AA7	A	115	125	Right-handed alpha
Helix 8	AA8	A	132	143	Right-handed alpha
Helix 9	AA9	A	150	157	Right-handed alpha
Helix 10	AB1	A	161	165	Right-handed 310
Helix 11	AB2	A	184	195	Right-handed alpha
Helix 12	AB3	A	227	233	Right-handed alpha
Helix 13	AB4	A	293	301	Right-handed alpha
Helix 14	AB5	A	305	310	Right-handed alpha
Helix 15	AB6	A	311	313	Right-handed 310
Helix 16	AB7	A	340	343	Right-handed 310
Helix 17	AB8	A	354	359	Right-handed alpha
Helix 18	AB9	A	361	372	Right-handed alpha
Helix 19	AC1	A	372	383	Right-handed alpha
Helix 20	AC2	A	388	405	Right-handed alpha
Helix 21	AC3	A	442	446	Right-handed 310
Helix 22	AC4	A	457	476	Right-handed alpha
Helix 23	AC5	A	477	482	Right-handed 310
Helix 24	AC6	A	490	494	Right-handed 310
Helix 25	AC7	A	499	507	Right-handed alpha
Helix 26	AC8	A	508	510	Right-handed 310
Helix 27	AC9	A	525	529	Right-handed 310
Helix 28	AD1	A	560	583	Right-handed alpha
Helix 29	AD2	M	3	8	Right-handed alpha
Helix 30	AD3	M	11	15	Right-handed 310
Helix 31	AD4	M	28	39	Right-handed alpha
Helix 32	AD5	M	59	64	Right-handed alpha
Helix 33	AD6	M	65	68	Right-handed 310
Helix 34	AD7	M	101	106	Right-handed 310
Helix 35	AD8	M	115	125	Right-handed alpha
Helix 36	AD9	M	132	143	Right-handed alpha
Helix 37	AE1	M	150	157	Right-handed alpha
Helix 38	AE2	M	161	165	Right-handed 310
Helix 39	AE3	M	184	195	Right-handed alpha
Helix 40	AE4	M	227	233	Right-handed alpha
Helix 41	AE5	M	293	301	Right-handed alpha
Helix 42	AE6	M	305	310	Right-handed alpha
Helix 43	AE7	M	311	313	Right-handed 310
Helix 44	AE8	M	340	343	Right-handed 310
Helix 45	AE9	M	354	359	Right-handed alpha
Helix 46	AF1	M	361	372	Right-handed alpha
Helix 47	AF2	M	372	383	Right-handed alpha
Helix 48	AF3	M	388	405	Right-handed alpha
Helix 49	AF4	M	442	446	Right-handed 310
Helix 50	AF5	M	457	476	Right-handed alpha
Helix 51	AF6	M	477	482	Right-handed 310
Helix 52	AF7	M	490	494	Right-handed 310
Helix 53	AF8	M	499	507	Right-handed alpha
Helix 54	AF9	M	508	510	Right-handed 310
Helix 55	AG1	M	525	529	Right-handed 310
Helix 56	AG2	M	560	582	Right-handed alpha

There are 14 sheets in PDB entry 9H7Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	246	first strand
Strand 2	A	46	50	parallel
Strand 3	A	19	25	parallel
Strand 4	A	277	287	parallel
Strand 5	A	263	270	anti-parallel
Strand 6	A	249	256	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	246	first strand
Strand 2	A	46	50	parallel
Strand 3	A	19	25	parallel
Strand 4	A	277	287	parallel
Strand 5	A	544	546	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	81	first strand
Strand 2	A	93	94	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	144	146	first strand
Strand 2	A	171	173	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	211	213	first strand
Strand 2	A	347	353	anti-parallel
Strand 3	A	409	416	anti-parallel
Strand 4	A	420	427	anti-parallel
Strand 5	A	330	338	anti-parallel
Strand 6	A	484	489	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	211	213	first strand
Strand 2	A	347	353	anti-parallel
Strand 3	A	409	416	anti-parallel
Strand 4	A	420	427	anti-parallel
Strand 5	A	330	338	anti-parallel
Strand 6	A	512	513	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	326	first strand
Strand 2	A	434	438	anti-parallel
Strand 3	A	448	451	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	242	245	first strand
Strand 2	M	46	49	parallel
Strand 3	M	19	25	parallel
Strand 4	M	276	287	parallel
Strand 5	M	263	270	anti-parallel
Strand 6	M	249	256	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	242	245	first strand
Strand 2	M	46	49	parallel
Strand 3	M	19	25	parallel
Strand 4	M	276	287	parallel
Strand 5	M	544	546	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	80	81	first strand
Strand 2	M	93	94	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	144	146	first strand
Strand 2	M	171	173	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	211	213	first strand
Strand 2	M	347	353	anti-parallel
Strand 3	M	409	416	anti-parallel
Strand 4	M	421	427	anti-parallel
Strand 5	M	330	338	anti-parallel
Strand 6	M	484	489	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	211	213	first strand
Strand 2	M	347	353	anti-parallel
Strand 3	M	409	416	anti-parallel
Strand 4	M	421	427	anti-parallel
Strand 5	M	330	338	anti-parallel
Strand 6	M	512	513	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	435	438	first strand
Strand 2	M	448	451	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9H7Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
9H7Z