Analysis of interatomic Contacts of Structural Units in PDB entry:
9H89

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9H89 entry

There are 5 chains in PDB entry 9H89 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 92	TRP 810
B	LEU 22	ARG 392
C	CYS 25	LEU 91
D	GLU 26	SER 243
E	LEU 23	ASN 113

There are 28 helices in PDB entry 9H89. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	106	118	Right-handed alpha
Helix 2	AA2	A	126	144	Right-handed alpha
Helix 3	AA3	A	189	196	Right-handed alpha
Helix 4	AA4	A	215	234	Right-handed alpha
Helix 5	AA5	A	280	289	Right-handed alpha
Helix 6	AA6	A	297	316	Right-handed alpha
Helix 7	AA7	A	361	367	Right-handed alpha
Helix 8	AA8	A	378	393	Right-handed alpha
Helix 9	AA9	A	542	553	Right-handed alpha
Helix 10	AB1	A	622	624	Right-handed 310
Helix 11	AB2	A	647	651	Right-handed 310
Helix 12	AB3	B	23	27	Right-handed 310
Helix 13	AB4	B	232	236	Right-handed 310
Helix 14	AB5	C	39	43	Right-handed 310
Helix 15	AB6	C	62	66	Right-handed 310
Helix 16	AB7	D	31	46	Right-handed alpha
Helix 17	AB8	D	47	62	Right-handed alpha
Helix 18	AB9	D	66	82	Right-handed alpha
Helix 19	AC1	D	84	99	Right-handed alpha
Helix 20	AC2	D	104	119	Right-handed alpha
Helix 21	AC3	D	123	129	Right-handed alpha
Helix 22	AC4	D	136	154	Right-handed alpha
Helix 23	AC5	D	159	189	Right-handed alpha
Helix 24	AC6	D	190	205	Right-handed alpha
Helix 25	AC7	D	208	225	Right-handed alpha
Helix 26	AC8	D	227	242	Right-handed alpha
Helix 27	AC9	E	39	46	Right-handed alpha
Helix 28	AD1	E	51	60	Right-handed alpha

There are 15 sheets in PDB entry 9H89. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	100	first strand
Strand 2	A	162	170	parallel
Strand 3	A	150	158	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	183	first strand
Strand 2	A	253	261	parallel
Strand 3	A	239	247	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	276	first strand
Strand 2	A	334	342	parallel
Strand 3	A	321	329	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	355	first strand
Strand 2	A	411	420	parallel
Strand 3	A	395	404	anti-parallel

Back to list of sheets
Back to top of page

There are 17 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	427	433	first strand
Strand 2	A	439	444	anti-parallel
Strand 3	A	455	463	anti-parallel
Strand 4	A	466	479	anti-parallel
Strand 5	A	483	494	anti-parallel
Strand 6	A	505	520	anti-parallel
Strand 7	A	523	537	anti-parallel
Strand 8	A	565	581	anti-parallel
Strand 9	A	590	600	anti-parallel
Strand 10	A	608	620	anti-parallel
Strand 11	A	628	640	anti-parallel
Strand 12	A	710	720	anti-parallel
Strand 13	A	734	745	anti-parallel
Strand 14	A	767	777	anti-parallel
Strand 15	A	782	792	anti-parallel
Strand 16	A	802	806	anti-parallel
Strand 17	A	427	433	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	51	first strand
Strand 2	B	386	391	anti-parallel
Strand 3	B	377	381	anti-parallel
Strand 4	B	372	374	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	68	first strand
Strand 2	B	71	75	anti-parallel
Strand 3	B	80	85	anti-parallel
Strand 4	B	91	96	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	118	first strand
Strand 2	B	121	126	anti-parallel
Strand 3	B	130	135	anti-parallel
Strand 4	B	141	146	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	156	158	first strand
Strand 2	B	161	165	anti-parallel
Strand 3	B	170	175	anti-parallel
Strand 4	B	181	186	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	201	203	first strand
Strand 2	B	206	211	anti-parallel
Strand 3	B	215	219	anti-parallel
Strand 4	B	226	229	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	252	254	first strand
Strand 2	B	257	260	anti-parallel
Strand 3	B	268	271	anti-parallel
Strand 4	B	277	280	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	286	291	first strand
Strand 2	B	295	300	anti-parallel
Strand 3	B	305	309	anti-parallel
Strand 4	B	315	319	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	331	333	first strand
Strand 2	B	336	340	anti-parallel
Strand 3	B	345	350	anti-parallel
Strand 4	B	356	361	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	35	first strand
Strand 2	E	72	80	anti-parallel
Strand 3	E	64	65	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	35	first strand
Strand 2	E	72	80	anti-parallel
Strand 3	E	87	95	anti-parallel
Strand 4	E	101	108	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9H89

Analysis of interatomic Contacts of Structural Units in PDB entry:
9H89