Analysis of interatomic Contacts of Structural Units in PDB entry:
9H8L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H8L entry

There is 1 chain in PDB entry 9H8L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11ASP 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 9H8L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 40Right-handed alpha
Helix 2
AA2
A
55 65Right-handed alpha
Helix 3
AA3
A
68 70Right-handed 310
Helix 4
AA4
A
83 87Right-handed 310
Helix 5
AA5
A
90 95Right-handed alpha
Helix 6
AA6
A
109 114Right-handed 310
Helix 7
AA7
A
115 120Right-handed alpha
Helix 8
AA8
A
124 145Right-handed alpha
Helix 9
AA9
A
157 170Right-handed alpha
Helix 10
AB1
A
174 178Right-handed 310
Helix 11
AB2
A
179 186Right-handed alpha
Helix 12
AB3
A
188 204Right-handed alpha
Helix 13
AB4
A
217 240Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9H8L.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 76first strand
Strand 2
A
103 107parallel
Strand 3
A
43 49parallel
Strand 4
A
147 155parallel
Strand 5
A
210 214parallel
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