Analysis of interatomic Contacts of Structural Units in PDB entry:
9H8O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H8O entry

There are 2 chains in PDB entry 9H8O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 10GLN 576
B
 SER 10GLN 576
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9H8O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 22Right-handed alpha
Helix 2
AA2
A
26 55Right-handed alpha
Helix 3
AA3
A
65 108Right-handed alpha
Helix 4
AA4
A
113 118Right-handed alpha
Helix 5
AA5
A
129 161Right-handed alpha
Helix 6
AA6
A
164 182Right-handed alpha
Helix 7
AA7
A
246 275Right-handed alpha
Helix 8
AA8
A
282 322Right-handed alpha
Helix 9
AA9
A
380 388Right-handed alpha
Helix 10
AB1
A
410 416Right-handed alpha
Helix 11
AB2
A
431 436Right-handed alpha
Helix 12
AB3
A
445 455Right-handed alpha
Helix 13
AB4
A
458 462Right-handed alpha
Helix 14
AB5
A
481 495Right-handed alpha
Helix 15
AB6
A
514 525Right-handed alpha
Helix 16
AB7
A
560 566Right-handed alpha
Helix 17
AB8
A
571 575Right-handed 310
Helix 18
AB9
B
11 22Right-handed alpha
Helix 19
AC1
B
26 55Right-handed alpha
Helix 20
AC2
B
65 108Right-handed alpha
Helix 21
AC3
B
113 118Right-handed alpha
Helix 22
AC4
B
129 161Right-handed alpha
Helix 23
AC5
B
164 182Right-handed alpha
Helix 24
AC6
B
246 275Right-handed alpha
Helix 25
AC7
B
282 322Right-handed alpha
Helix 26
AC8
B
380 388Right-handed alpha
Helix 27
AC9
B
410 416Right-handed alpha
Helix 28
AD1
B
431 436Right-handed alpha
Helix 29
AD2
B
445 455Right-handed alpha
Helix 30
AD3
B
458 462Right-handed alpha
Helix 31
AD4
B
481 495Right-handed alpha
Helix 32
AD5
B
514 525Right-handed alpha
Helix 33
AD6
B
560 566Right-handed alpha
Helix 34
AD7
B
571 575Right-handed 310
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There are 4 sheets in PDB entry 9H8O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 364first strand
Strand 2
A
341 348anti-parallel
Strand 3
A
396 400anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 421first strand
Strand 2
A
499 503parallel
Strand 3
A
529 533parallel
Strand 4
A
368 373parallel
Strand 5
A
545 550parallel
Strand 6
A
553 557anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
357 364first strand
Strand 2
B
341 348anti-parallel
Strand 3
B
396 400anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
417 421first strand
Strand 2
B
499 503parallel
Strand 3
B
529 533parallel
Strand 4
B
368 373parallel
Strand 5
B
545 550parallel
Strand 6
B
553 557anti-parallel
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