Analysis of interatomic Contacts of Structural Units in PDB entry:
9H92


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9H92 entry

There is 1 chain in PDB entry 9H92 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5LEU 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9H92. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
18 20Right-handed 310
Helix 3
AA3
A
29 35Right-handed alpha
Helix 4
AA4
A
53 67Right-handed alpha
Helix 5
AA5
A
82 86Right-handed 310
Helix 6
AA6
A
116 127Right-handed alpha
Helix 7
AA7
A
141 146Right-handed alpha
Helix 8
AA8
A
154 159Right-handed alpha
Helix 9
AA9
A
160 163Right-handed 310
Helix 10
AB1
A
185 196Right-handed alpha
Helix 11
AB2
A
197 199Right-handed 310
Helix 12
AB3
A
227 244Right-handed alpha
Helix 13
AB4
A
271 279Right-handed alpha
Helix 14
AB5
A
280 284Right-handed 310
Helix 15
AB6
A
298 313Right-handed alpha
Helix 16
AB7
A
335 349Right-handed alpha
Helix 17
AB8
A
364 370Right-handed 310
Helix 18
AB9
A
397 412Right-handed alpha
Helix 19
AC1
A
432 442Right-handed alpha
Helix 20
AC2
A
444 456Right-handed alpha
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There are 4 sheets in PDB entry 9H92. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
47 49anti-parallel
Strand 3
A
90 93parallel
Strand 4
A
71 74parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 103first strand
Strand 2
A
108 111anti-parallel
Strand 3
A
201 208anti-parallel
Strand 4
A
165 171anti-parallel
Strand 5
A
177 180anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
210 211anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 296first strand
Strand 2
A
216 224anti-parallel
Strand 3
A
261 268anti-parallel
Strand 4
A
252 257anti-parallel
Strand 5
A
355 362anti-parallel
Strand 6
A
384 392anti-parallel
Strand 7
A
320 328anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il