Analysis of interatomic Contacts of Structural Units in PDB entry:
9HAC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HAC entry

There are 4 chains in PDB entry 9HAC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2HIS 122
C
 GLY 2HIS 122
B
 PRO 2MET 138
D
 GLN 4GLU 136
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 9HAC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 9Right-handed 310
Helix 2
AA2
C
5 10Right-handed alpha
Helix 3
AA3
B
3 26Right-handed alpha
Helix 4
AA4
B
35 49Right-handed alpha
Helix 5
AA5
B
86 116Right-handed alpha
Helix 6
AA6
B
120 135Right-handed alpha
Helix 7
AA7
D
5 24Right-handed alpha
Helix 8
AA8
D
33 49Right-handed alpha
Helix 9
AA9
D
86 116Right-handed alpha
Helix 10
AB1
D
121 134Right-handed alpha
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There are 2 sheets in PDB entry 9HAC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 68first strand
Strand 2
B
74 83anti-parallel
Strand 3
A
24 34anti-parallel
Strand 4
A
38 46anti-parallel
Strand 5
A
55 61anti-parallel
Strand 6
A
67 72anti-parallel
Strand 7
A
78 85anti-parallel
Strand 8
A
90 97anti-parallel
Strand 9
A
102 109anti-parallel
Strand 10
A
14 19anti-parallel
Strand 11
A
24 34anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
59 68first strand
Strand 2
D
74 83anti-parallel
Strand 3
C
24 34anti-parallel
Strand 4
C
38 46anti-parallel
Strand 5
C
55 61anti-parallel
Strand 6
C
67 72anti-parallel
Strand 7
C
78 85anti-parallel
Strand 8
C
90 97anti-parallel
Strand 9
C
102 109anti-parallel
Strand 10
C
14 19anti-parallel
Strand 11
C
24 34anti-parallel
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