Analysis of interatomic Contacts of Structural Units in PDB entry:
9HAN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9HAN entry

There are 6 chains in PDB entry 9HAN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	SER 2193	ARG 2436
A	GLY 581	ASP 1027
B	GLY 587	CYS 1027
F	SER 2193	ARG 2436
D	GLY 581	ASP 1027
E	GLY 587	CYS 1027

There are 52 helices in PDB entry 9HAN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	2205	2216	Right-handed alpha
Helix 2	AA2	C	2243	2261	Right-handed alpha
Helix 3	AA3	C	2294	2305	Right-handed alpha
Helix 4	AA4	C	2315	2326	Right-handed alpha
Helix 5	AA5	C	2327	2330	Right-handed 310
Helix 6	AA6	C	2352	2365	Right-handed alpha
Helix 7	AA7	C	2377	2385	Right-handed alpha
Helix 8	AA8	C	2403	2414	Right-handed alpha
Helix 9	AA9	A	592	604	Right-handed alpha
Helix 10	AB1	A	840	861	Right-handed alpha
Helix 11	AB2	A	896	906	Right-handed alpha
Helix 12	AB3	A	915	930	Right-handed alpha
Helix 13	AB4	A	950	965	Right-handed alpha
Helix 14	AB5	A	978	988	Right-handed alpha
Helix 15	AB6	A	994	1001	Right-handed alpha
Helix 16	AB7	A	1007	1013	Right-handed alpha
Helix 17	AB8	A	1015	1026	Right-handed alpha
Helix 18	AB9	B	598	610	Right-handed alpha
Helix 19	AC1	B	853	871	Right-handed alpha
Helix 20	AC2	B	892	896	Right-handed 310
Helix 21	AC3	B	905	915	Right-handed alpha
Helix 22	AC4	B	924	943	Right-handed alpha
Helix 23	AC5	B	964	975	Right-handed alpha
Helix 24	AC6	B	989	998	Right-handed alpha
Helix 25	AC7	B	1009	1014	Right-handed 310
Helix 26	AC8	B	1015	1027	Right-handed alpha
Helix 27	AC9	F	2204	2214	Right-handed alpha
Helix 28	AD1	F	2243	2261	Right-handed alpha
Helix 29	AD2	F	2294	2305	Right-handed alpha
Helix 30	AD3	F	2315	2326	Right-handed alpha
Helix 31	AD4	F	2327	2330	Right-handed 310
Helix 32	AD5	F	2352	2365	Right-handed alpha
Helix 33	AD6	F	2377	2385	Right-handed alpha
Helix 34	AD7	F	2403	2414	Right-handed alpha
Helix 35	AD8	D	592	604	Right-handed alpha
Helix 36	AD9	D	841	861	Right-handed alpha
Helix 37	AE1	D	895	906	Right-handed alpha
Helix 38	AE2	D	915	930	Right-handed alpha
Helix 39	AE3	D	950	965	Right-handed alpha
Helix 40	AE4	D	978	988	Right-handed alpha
Helix 41	AE5	D	994	1001	Right-handed alpha
Helix 42	AE6	D	1007	1013	Right-handed alpha
Helix 43	AE7	D	1015	1026	Right-handed alpha
Helix 44	AE8	E	598	610	Right-handed alpha
Helix 45	AE9	E	853	871	Right-handed alpha
Helix 46	AF1	E	892	896	Right-handed 310
Helix 47	AF2	E	905	915	Right-handed alpha
Helix 48	AF3	E	924	943	Right-handed alpha
Helix 49	AF4	E	964	975	Right-handed alpha
Helix 50	AF5	E	989	998	Right-handed alpha
Helix 51	AF6	E	1009	1014	Right-handed 310
Helix 52	AF7	E	1015	1027	Right-handed alpha

There are 12 sheets in PDB entry 9HAN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2283	2287	first strand
Strand 2	C	2272	2279	anti-parallel
Strand 3	C	2230	2237	parallel
Strand 4	C	2338	2342	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2331	2332	first strand
Strand 2	B	830	831	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2371	2373	first strand
Strand 2	C	2394	2396	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	883	884	first strand
Strand 2	A	871	877	anti-parallel
Strand 3	A	828	833	parallel
Strand 4	A	939	940	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	970	973	first strand
Strand 2	A	1002	1005	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	842	846	first strand
Strand 2	B	951	955	parallel
Strand 3	B	978	984	parallel
Strand 4	B	1004	1007	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2283	2287	first strand
Strand 2	F	2272	2279	anti-parallel
Strand 3	F	2230	2237	parallel
Strand 4	F	2338	2342	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2331	2332	first strand
Strand 2	E	830	831	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2371	2373	first strand
Strand 2	F	2394	2396	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	830	833	first strand
Strand 2	D	873	877	parallel
Strand 3	D	883	884	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	970	973	first strand
Strand 2	D	1002	1005	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	883	886	first strand
Strand 2	E	840	845	parallel
Strand 3	E	951	954	parallel
Strand 4	E	978	984	parallel
Strand 5	E	1004	1007	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9HAN

Analysis of interatomic Contacts of Structural Units in PDB entry:
9HAN