Analysis of interatomic Contacts of Structural Units in PDB entry:
9HBT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9HBT entry

There are 5 chains in PDB entry 9HBT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 34	GLY 350
B	GLU 34	GLY 350
C	GLU 34	GLY 350
D	GLU 34	GLY 350
E	GLU 34	ALA 349

There are 77 helices in PDB entry 9HBT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	51	Right-handed alpha
Helix 2	AA2	A	52	54	Right-handed 310
Helix 3	AA3	A	58	74	Right-handed alpha
Helix 4	AA4	A	88	101	Right-handed alpha
Helix 5	AA5	A	119	128	Right-handed alpha
Helix 6	AA6	A	134	142	Right-handed alpha
Helix 7	AA7	A	143	173	Right-handed alpha
Helix 8	AA8	A	182	187	Right-handed alpha
Helix 9	AA9	A	193	200	Right-handed alpha
Helix 10	AB1	A	206	215	Right-handed alpha
Helix 11	AB2	A	232	239	Right-handed alpha
Helix 12	AB3	A	249	258	Right-handed alpha
Helix 13	AB4	A	263	268	Right-handed 310
Helix 14	AB5	A	313	318	Right-handed alpha
Helix 15	AB6	A	340	349	Right-handed alpha
Helix 16	AB7	B	36	51	Right-handed alpha
Helix 17	AB8	B	52	54	Right-handed 310
Helix 18	AB9	B	58	74	Right-handed alpha
Helix 19	AC1	B	88	101	Right-handed alpha
Helix 20	AC2	B	119	128	Right-handed alpha
Helix 21	AC3	B	134	142	Right-handed alpha
Helix 22	AC4	B	143	175	Right-handed alpha
Helix 23	AC5	B	182	187	Right-handed alpha
Helix 24	AC6	B	193	200	Right-handed alpha
Helix 25	AC7	B	206	215	Right-handed alpha
Helix 26	AC8	B	232	237	Right-handed alpha
Helix 27	AC9	B	249	258	Right-handed alpha
Helix 28	AD1	B	263	268	Right-handed 310
Helix 29	AD2	B	307	312	Right-handed alpha
Helix 30	AD3	B	340	349	Right-handed alpha
Helix 31	AD4	C	36	51	Right-handed alpha
Helix 32	AD5	C	52	54	Right-handed 310
Helix 33	AD6	C	58	74	Right-handed alpha
Helix 34	AD7	C	88	101	Right-handed alpha
Helix 35	AD8	C	119	128	Right-handed alpha
Helix 36	AD9	C	134	142	Right-handed alpha
Helix 37	AE1	C	143	175	Right-handed alpha
Helix 38	AE2	C	182	187	Right-handed alpha
Helix 39	AE3	C	193	200	Right-handed alpha
Helix 40	AE4	C	206	215	Right-handed alpha
Helix 41	AE5	C	232	237	Right-handed alpha
Helix 42	AE6	C	249	258	Right-handed alpha
Helix 43	AE7	C	263	268	Right-handed 310
Helix 44	AE8	C	317	320	Right-handed 310
Helix 45	AE9	C	340	349	Right-handed alpha
Helix 46	AF1	D	36	51	Right-handed alpha
Helix 47	AF2	D	52	54	Right-handed 310
Helix 48	AF3	D	58	74	Right-handed alpha
Helix 49	AF4	D	88	101	Right-handed alpha
Helix 50	AF5	D	119	128	Right-handed alpha
Helix 51	AF6	D	134	142	Right-handed alpha
Helix 52	AF7	D	143	173	Right-handed alpha
Helix 53	AF8	D	182	187	Right-handed alpha
Helix 54	AF9	D	193	200	Right-handed alpha
Helix 55	AG1	D	206	215	Right-handed alpha
Helix 56	AG2	D	232	237	Right-handed alpha
Helix 57	AG3	D	249	258	Right-handed alpha
Helix 58	AG4	D	263	268	Right-handed 310
Helix 59	AG5	D	307	312	Right-handed alpha
Helix 60	AG6	D	317	320	Right-handed 310
Helix 61	AG7	D	340	349	Right-handed alpha
Helix 62	AG8	E	36	51	Right-handed alpha
Helix 63	AG9	E	52	54	Right-handed 310
Helix 64	AH1	E	58	74	Right-handed alpha
Helix 65	AH2	E	88	101	Right-handed alpha
Helix 66	AH3	E	119	128	Right-handed alpha
Helix 67	AH4	E	134	142	Right-handed alpha
Helix 68	AH5	E	143	173	Right-handed alpha
Helix 69	AH6	E	182	187	Right-handed alpha
Helix 70	AH7	E	193	200	Right-handed alpha
Helix 71	AH8	E	205	215	Right-handed alpha
Helix 72	AH9	E	232	237	Right-handed alpha
Helix 73	AI1	E	249	258	Right-handed alpha
Helix 74	AI2	E	263	268	Right-handed 310
Helix 75	AI3	E	307	312	Right-handed alpha
Helix 76	AI4	E	317	320	Right-handed 310
Helix 77	AI5	E	340	349	Right-handed alpha

There are 15 sheets in PDB entry 9HBT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	110	first strand
Strand 2	A	114	115	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	270	273	first strand
Strand 2	A	276	282	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	286	first strand
Strand 2	A	322	327	anti-parallel
Strand 3	A	331	335	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	110	first strand
Strand 2	B	114	115	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	273	first strand
Strand 2	B	276	282	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	284	286	first strand
Strand 2	B	322	327	anti-parallel
Strand 3	B	331	335	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	110	first strand
Strand 2	C	114	115	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	270	273	first strand
Strand 2	C	276	282	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	284	286	first strand
Strand 2	C	322	327	anti-parallel
Strand 3	C	331	335	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	109	110	first strand
Strand 2	D	114	115	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	270	273	first strand
Strand 2	D	276	282	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	284	286	first strand
Strand 2	D	322	327	anti-parallel
Strand 3	D	331	335	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	109	110	first strand
Strand 2	E	114	115	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	270	273	first strand
Strand 2	E	276	282	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	284	286	first strand
Strand 2	E	322	327	anti-parallel
Strand 3	E	331	335	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9HBT

Analysis of interatomic Contacts of Structural Units in PDB entry:
9HBT