Analysis of interatomic Contacts of Structural Units in PDB entry:
9HBW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9HBW entry

There are 4 chains in PDB entry 9HBW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 34	GLY 350
B	GLU 34	GLY 350
C	GLU 34	GLY 350
D	GLU 34	GLY 350

There are 59 helices in PDB entry 9HBW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	51	Right-handed alpha
Helix 2	AA2	A	52	54	Right-handed 310
Helix 3	AA3	A	58	74	Right-handed alpha
Helix 4	AA4	A	88	101	Right-handed alpha
Helix 5	AA5	A	119	128	Right-handed alpha
Helix 6	AA6	A	134	142	Right-handed alpha
Helix 7	AA7	A	143	173	Right-handed alpha
Helix 8	AA8	A	182	187	Right-handed alpha
Helix 9	AA9	A	193	200	Right-handed alpha
Helix 10	AB1	A	206	214	Right-handed alpha
Helix 11	AB2	A	232	237	Right-handed alpha
Helix 12	AB3	A	249	258	Right-handed alpha
Helix 13	AB4	A	263	268	Right-handed 310
Helix 14	AB5	A	340	349	Right-handed alpha
Helix 15	AB6	B	36	51	Right-handed alpha
Helix 16	AB7	B	52	54	Right-handed 310
Helix 17	AB8	B	58	74	Right-handed alpha
Helix 18	AB9	B	88	101	Right-handed alpha
Helix 19	AC1	B	119	128	Right-handed alpha
Helix 20	AC2	B	134	142	Right-handed alpha
Helix 21	AC3	B	143	173	Right-handed alpha
Helix 22	AC4	B	182	187	Right-handed alpha
Helix 23	AC5	B	193	200	Right-handed alpha
Helix 24	AC6	B	206	215	Right-handed alpha
Helix 25	AC7	B	232	237	Right-handed alpha
Helix 26	AC8	B	249	258	Right-handed alpha
Helix 27	AC9	B	263	270	Right-handed 310
Helix 28	AD1	B	307	312	Right-handed alpha
Helix 29	AD2	B	340	349	Right-handed alpha
Helix 30	AD3	C	36	51	Right-handed alpha
Helix 31	AD4	C	52	54	Right-handed 310
Helix 32	AD5	C	58	73	Right-handed alpha
Helix 33	AD6	C	88	101	Right-handed alpha
Helix 34	AD7	C	118	128	Right-handed alpha
Helix 35	AD8	C	134	142	Right-handed alpha
Helix 36	AD9	C	143	172	Right-handed alpha
Helix 37	AE1	C	182	187	Right-handed alpha
Helix 38	AE2	C	193	200	Right-handed alpha
Helix 39	AE3	C	206	214	Right-handed alpha
Helix 40	AE4	C	232	237	Right-handed alpha
Helix 41	AE5	C	249	258	Right-handed alpha
Helix 42	AE6	C	263	268	Right-handed 310
Helix 43	AE7	C	307	312	Right-handed alpha
Helix 44	AE8	C	340	349	Right-handed alpha
Helix 45	AE9	D	36	51	Right-handed alpha
Helix 46	AF1	D	52	54	Right-handed 310
Helix 47	AF2	D	58	74	Right-handed alpha
Helix 48	AF3	D	88	101	Right-handed alpha
Helix 49	AF4	D	119	128	Right-handed alpha
Helix 50	AF5	D	134	142	Right-handed alpha
Helix 51	AF6	D	143	175	Right-handed alpha
Helix 52	AF7	D	182	187	Right-handed alpha
Helix 53	AF8	D	193	200	Right-handed alpha
Helix 54	AF9	D	205	215	Right-handed alpha
Helix 55	AG1	D	232	237	Right-handed alpha
Helix 56	AG2	D	249	258	Right-handed alpha
Helix 57	AG3	D	263	268	Right-handed 310
Helix 58	AG4	D	307	312	Right-handed alpha
Helix 59	AG5	D	340	349	Right-handed alpha

There are 10 sheets in PDB entry 9HBW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	270	272	first strand
Strand 2	A	280	282	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	286	first strand
Strand 2	A	322	327	anti-parallel
Strand 3	A	331	335	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	110	first strand
Strand 2	B	114	115	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	284	286	first strand
Strand 2	B	322	327	anti-parallel
Strand 3	B	331	335	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	110	first strand
Strand 2	C	114	115	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	270	272	first strand
Strand 2	C	280	282	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	285	286	first strand
Strand 2	C	322	326	anti-parallel
Strand 3	C	331	335	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	109	110	first strand
Strand 2	D	114	115	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	270	273	first strand
Strand 2	D	276	282	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	285	287	first strand
Strand 2	D	322	326	anti-parallel
Strand 3	D	331	335	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9HBW

Analysis of interatomic Contacts of Structural Units in PDB entry:
9HBW