Analysis of interatomic Contacts of Structural Units in PDB entry:
9HBZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9HBZ entry

There are 6 chains in PDB entry 9HBZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 34	GLY 350
C	GLU 34	ALA 349
D	GLU 34	GLY 350
B	GLU 34	GLY 350
E	GLU 34	GLY 350
G	GLU 34	GLY 350

There are 91 helices in PDB entry 9HBZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	51	Right-handed alpha
Helix 2	AA2	A	52	54	Right-handed 310
Helix 3	AA3	A	58	74	Right-handed alpha
Helix 4	AA4	A	88	101	Right-handed alpha
Helix 5	AA5	A	118	128	Right-handed alpha
Helix 6	AA6	A	134	142	Right-handed alpha
Helix 7	AA7	A	143	173	Right-handed alpha
Helix 8	AA8	A	182	187	Right-handed alpha
Helix 9	AA9	A	193	200	Right-handed alpha
Helix 10	AB1	A	206	214	Right-handed alpha
Helix 11	AB2	A	232	237	Right-handed alpha
Helix 12	AB3	A	249	258	Right-handed alpha
Helix 13	AB4	A	263	268	Right-handed 310
Helix 14	AB5	A	317	320	Right-handed 310
Helix 15	AB6	A	340	349	Right-handed alpha
Helix 16	AB7	C	36	51	Right-handed alpha
Helix 17	AB8	C	52	54	Right-handed 310
Helix 18	AB9	C	58	74	Right-handed alpha
Helix 19	AC1	C	88	101	Right-handed alpha
Helix 20	AC2	C	119	127	Right-handed alpha
Helix 21	AC3	C	134	142	Right-handed alpha
Helix 22	AC4	C	143	172	Right-handed alpha
Helix 23	AC5	C	182	187	Right-handed alpha
Helix 24	AC6	C	193	200	Right-handed alpha
Helix 25	AC7	C	206	214	Right-handed alpha
Helix 26	AC8	C	232	237	Right-handed alpha
Helix 27	AC9	C	249	258	Right-handed alpha
Helix 28	AD1	C	263	268	Right-handed 310
Helix 29	AD2	C	307	312	Right-handed alpha
Helix 30	AD3	C	317	320	Right-handed 310
Helix 31	AD4	C	340	348	Right-handed alpha
Helix 32	AD5	D	36	51	Right-handed alpha
Helix 33	AD6	D	52	54	Right-handed 310
Helix 34	AD7	D	58	74	Right-handed alpha
Helix 35	AD8	D	88	101	Right-handed alpha
Helix 36	AD9	D	119	128	Right-handed alpha
Helix 37	AE1	D	134	142	Right-handed alpha
Helix 38	AE2	D	143	173	Right-handed alpha
Helix 39	AE3	D	182	187	Right-handed alpha
Helix 40	AE4	D	193	200	Right-handed alpha
Helix 41	AE5	D	206	215	Right-handed alpha
Helix 42	AE6	D	232	237	Right-handed alpha
Helix 43	AE7	D	249	258	Right-handed alpha
Helix 44	AE8	D	263	268	Right-handed 310
Helix 45	AE9	D	307	312	Right-handed alpha
Helix 46	AF1	D	317	320	Right-handed 310
Helix 47	AF2	D	340	349	Right-handed alpha
Helix 48	AF3	B	36	51	Right-handed alpha
Helix 49	AF4	B	52	54	Right-handed 310
Helix 50	AF5	B	58	74	Right-handed alpha
Helix 51	AF6	B	88	101	Right-handed alpha
Helix 52	AF7	B	119	128	Right-handed alpha
Helix 53	AF8	B	134	142	Right-handed alpha
Helix 54	AF9	B	143	173	Right-handed alpha
Helix 55	AG1	B	182	187	Right-handed alpha
Helix 56	AG2	B	193	200	Right-handed alpha
Helix 57	AG3	B	206	214	Right-handed alpha
Helix 58	AG4	B	232	237	Right-handed alpha
Helix 59	AG5	B	249	258	Right-handed alpha
Helix 60	AG6	B	263	268	Right-handed 310
Helix 61	AG7	B	317	320	Right-handed 310
Helix 62	AG8	B	340	349	Right-handed alpha
Helix 63	AG9	E	36	51	Right-handed alpha
Helix 64	AH1	E	52	54	Right-handed 310
Helix 65	AH2	E	58	74	Right-handed alpha
Helix 66	AH3	E	88	101	Right-handed alpha
Helix 67	AH4	E	119	128	Right-handed alpha
Helix 68	AH5	E	134	142	Right-handed alpha
Helix 69	AH6	E	143	175	Right-handed alpha
Helix 70	AH7	E	182	187	Right-handed alpha
Helix 71	AH8	E	193	200	Right-handed alpha
Helix 72	AH9	E	205	215	Right-handed alpha
Helix 73	AI1	E	232	239	Right-handed alpha
Helix 74	AI2	E	249	258	Right-handed alpha
Helix 75	AI3	E	263	268	Right-handed 310
Helix 76	AI4	E	340	349	Right-handed alpha
Helix 77	AI5	G	36	51	Right-handed alpha
Helix 78	AI6	G	52	54	Right-handed 310
Helix 79	AI7	G	58	74	Right-handed alpha
Helix 80	AI8	G	88	101	Right-handed alpha
Helix 81	AI9	G	119	128	Right-handed alpha
Helix 82	AJ1	G	134	142	Right-handed alpha
Helix 83	AJ2	G	143	175	Right-handed alpha
Helix 84	AJ3	G	182	188	Right-handed alpha
Helix 85	AJ4	G	193	200	Right-handed alpha
Helix 86	AJ5	G	205	215	Right-handed alpha
Helix 87	AJ6	G	232	237	Right-handed alpha
Helix 88	AJ7	G	249	258	Right-handed alpha
Helix 89	AJ8	G	263	268	Right-handed 310
Helix 90	AJ9	G	317	320	Right-handed 310
Helix 91	AK1	G	340	349	Right-handed alpha

There are 15 sheets in PDB entry 9HBZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	247	248	first strand
Strand 2	A	280	282	anti-parallel
Strand 3	A	270	272	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	285	286	first strand
Strand 2	A	322	326	anti-parallel
Strand 3	A	331	335	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	270	272	first strand
Strand 2	C	280	282	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	285	286	first strand
Strand 2	C	322	326	anti-parallel
Strand 3	C	331	335	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	109	110	first strand
Strand 2	D	114	115	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	247	248	first strand
Strand 2	D	276	282	anti-parallel
Strand 3	D	270	273	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	284	286	first strand
Strand 2	D	322	327	anti-parallel
Strand 3	D	331	335	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	248	first strand
Strand 2	B	280	282	anti-parallel
Strand 3	B	270	272	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	285	286	first strand
Strand 2	B	322	326	anti-parallel
Strand 3	B	331	335	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	109	110	first strand
Strand 2	E	114	115	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	270	273	first strand
Strand 2	E	276	282	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	284	286	first strand
Strand 2	E	322	327	anti-parallel
Strand 3	E	331	335	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	109	110	first strand
Strand 2	G	114	115	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	270	273	first strand
Strand 2	G	276	282	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	284	286	first strand
Strand 2	G	322	327	anti-parallel
Strand 3	G	331	335	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9HBZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9HBZ