Analysis of interatomic Contacts of Structural Units in PDB entry:
9HE2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HE2 entry

There are 2 chains in PDB entry 9HE2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 393
B
 MET 1LYS 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 9HE2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 16Right-handed alpha
Helix 2
AA2
A
23 37Right-handed alpha
Helix 3
AA3
A
40 44Right-handed 310
Helix 4
AA4
A
53 61Right-handed alpha
Helix 5
AA5
A
71 81Right-handed alpha
Helix 6
AA6
A
83 90Right-handed 310
Helix 7
AA7
A
97 106Right-handed alpha
Helix 8
AA8
A
156 165Right-handed alpha
Helix 9
AA9
A
167 175Right-handed alpha
Helix 10
AB1
A
179 195Right-handed alpha
Helix 11
AB2
A
207 225Right-handed alpha
Helix 12
AB3
A
237 254Right-handed alpha
Helix 13
AB4
A
258 280Right-handed alpha
Helix 14
AB5
A
287 307Right-handed alpha
Helix 15
AB6
A
309 324Right-handed alpha
Helix 16
AB7
A
333 351Right-handed alpha
Helix 17
AB8
A
365 381Right-handed alpha
Helix 18
AB9
A
383 392Right-handed alpha
Helix 19
AC1
B
2 16Right-handed alpha
Helix 20
AC2
B
23 36Right-handed alpha
Helix 21
AC3
B
40 42Right-handed 310
Helix 22
AC4
B
53 61Right-handed alpha
Helix 23
AC5
B
71 81Right-handed alpha
Helix 24
AC6
B
83 90Right-handed 310
Helix 25
AC7
B
97 106Right-handed alpha
Helix 26
AC8
B
157 165Right-handed alpha
Helix 27
AC9
B
167 175Right-handed alpha
Helix 28
AD1
B
179 196Right-handed alpha
Helix 29
AD2
B
207 225Right-handed alpha
Helix 30
AD3
B
237 254Right-handed alpha
Helix 31
AD4
B
258 280Right-handed alpha
Helix 32
AD5
B
287 306Right-handed alpha
Helix 33
AD6
B
309 324Right-handed alpha
Helix 34
AD7
B
335 350Right-handed alpha
Helix 35
AD8
B
365 381Right-handed alpha
Helix 36
AD9
B
383 392Right-handed alpha
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There are 4 sheets in PDB entry 9HE2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 20first strand
Strand 2
A
231 234anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 113first strand
Strand 2
A
49 52parallel
Strand 3
A
118 121anti-parallel
Strand 4
A
130 136anti-parallel
Strand 5
A
141 142anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 20first strand
Strand 2
B
231 234anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 113first strand
Strand 2
B
44 52parallel
Strand 3
B
118 125anti-parallel
Strand 4
B
130 136anti-parallel
Strand 5
B
142 144anti-parallel
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