Analysis of interatomic Contacts of Structural Units in PDB entry:
9HE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HE9 entry

There are 3 chains in PDB entry 9HE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 14LEU 348
B
 GLN 14LEU 348
C
 GLN 14LEU 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 9HE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 61Right-handed alpha
Helix 2
AA2
A
71 84Right-handed alpha
Helix 3
AA3
A
86 102Right-handed alpha
Helix 4
AA4
A
115 119Right-handed 310
Helix 5
AA5
A
147 151Right-handed 310
Helix 6
AA6
A
157 172Right-handed alpha
Helix 7
AA7
A
177 196Right-handed alpha
Helix 8
AA8
A
202 220Right-handed alpha
Helix 9
AA9
A
232 241Right-handed alpha
Helix 10
AB1
A
260 268Right-handed alpha
Helix 11
AB2
A
295 310Right-handed alpha
Helix 12
AB3
A
314 336Right-handed alpha
Helix 13
AB4
B
52 61Right-handed alpha
Helix 14
AB5
B
71 84Right-handed alpha
Helix 15
AB6
B
86 102Right-handed alpha
Helix 16
AB7
B
115 119Right-handed 310
Helix 17
AB8
B
147 151Right-handed 310
Helix 18
AB9
B
157 172Right-handed alpha
Helix 19
AC1
B
177 196Right-handed alpha
Helix 20
AC2
B
202 220Right-handed alpha
Helix 21
AC3
B
232 241Right-handed alpha
Helix 22
AC4
B
260 268Right-handed alpha
Helix 23
AC5
B
295 310Right-handed alpha
Helix 24
AC6
B
314 336Right-handed alpha
Helix 25
AC7
C
52 61Right-handed alpha
Helix 26
AC8
C
71 84Right-handed alpha
Helix 27
AC9
C
86 102Right-handed alpha
Helix 28
AD1
C
115 119Right-handed 310
Helix 29
AD2
C
147 151Right-handed 310
Helix 30
AD3
C
157 172Right-handed alpha
Helix 31
AD4
C
177 196Right-handed alpha
Helix 32
AD5
C
202 220Right-handed alpha
Helix 33
AD6
C
232 241Right-handed alpha
Helix 34
AD7
C
260 268Right-handed alpha
Helix 35
AD8
C
295 310Right-handed alpha
Helix 36
AD9
C
314 336Right-handed alpha
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There are 6 sheets in PDB entry 9HE9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
109 110anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
273 275anti-parallel
Strand 3
A
283 285anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 70first strand
Strand 2
B
109 110anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 201first strand
Strand 2
B
273 275anti-parallel
Strand 3
B
283 285anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
69 70first strand
Strand 2
C
109 110anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
200 201first strand
Strand 2
C
273 275anti-parallel
Strand 3
C
283 285anti-parallel
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