Analysis of interatomic Contacts of Structural Units in PDB entry:
9HEH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HEH entry

There is 1 chain in PDB entry 9HEH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 23LEU 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 9HEH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 71Right-handed alpha
Helix 2
AA2
A
75 89Right-handed alpha
Helix 3
AA3
A
108 113Right-handed 310
Helix 4
AA4
A
150 160Right-handed alpha
Helix 5
AA5
A
202 211Right-handed alpha
Helix 6
AA6
A
213 218Right-handed 310
Helix 7
AA7
A
235 239Right-handed 310
Helix 8
AA8
A
246 256Right-handed alpha
Helix 9
AA9
A
296 306Right-handed alpha
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There are 3 sheets in PDB entry 9HEH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 140first strand
Strand 2
A
125 130anti-parallel
Strand 3
A
95 100anti-parallel
Strand 4
A
191 201anti-parallel
Strand 5
A
175 188anti-parallel
Strand 6
A
163 164anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 140first strand
Strand 2
A
125 130anti-parallel
Strand 3
A
95 100anti-parallel
Strand 4
A
191 201anti-parallel
Strand 5
A
175 188anti-parallel
Strand 6
A
168 172anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 232first strand
Strand 2
A
220 224anti-parallel
Strand 3
A
288 295anti-parallel
Strand 4
A
270 279anti-parallel
Strand 5
A
259 265anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il