Analysis of interatomic Contacts of Structural Units in PDB entry:
9HF1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9HF1 entry

There are 7 chains in PDB entry 9HF1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 369
B	MET 1	LEU 369
C	MET 1	LEU 369
D	MET 1	LEU 369
E	MET 1	LEU 369
F	MET 1	LEU 369
G	MET 1	LEU 369

There are105 helices in PDB entry 9HF1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	11	Right-handed alpha
Helix 2	AA2	A	32	55	Right-handed alpha
Helix 3	AA3	A	73	90	Right-handed alpha
Helix 4	AA4	A	99	131	Right-handed alpha
Helix 5	AA5	A	131	156	Right-handed alpha
Helix 6	AA6	A	193	205	Right-handed alpha
Helix 7	AA7	A	206	236	Right-handed alpha
Helix 8	AA8	A	237	240	Right-handed 310
Helix 9	AA9	A	249	255	Right-handed alpha
Helix 10	AB1	A	267	295	Right-handed alpha
Helix 11	AB2	A	295	300	Right-handed alpha
Helix 12	AB3	A	303	310	Right-handed alpha
Helix 13	AB4	A	325	339	Right-handed alpha
Helix 14	AB5	A	341	355	Right-handed alpha
Helix 15	AB6	A	363	369	Right-handed alpha
Helix 16	AB7	B	2	11	Right-handed alpha
Helix 17	AB8	B	32	55	Right-handed alpha
Helix 18	AB9	B	73	90	Right-handed alpha
Helix 19	AC1	B	99	131	Right-handed alpha
Helix 20	AC2	B	131	156	Right-handed alpha
Helix 21	AC3	B	193	205	Right-handed alpha
Helix 22	AC4	B	206	236	Right-handed alpha
Helix 23	AC5	B	237	240	Right-handed 310
Helix 24	AC6	B	249	255	Right-handed alpha
Helix 25	AC7	B	267	295	Right-handed alpha
Helix 26	AC8	B	295	300	Right-handed alpha
Helix 27	AC9	B	303	310	Right-handed alpha
Helix 28	AD1	B	325	339	Right-handed alpha
Helix 29	AD2	B	341	355	Right-handed alpha
Helix 30	AD3	B	363	369	Right-handed alpha
Helix 31	AD4	C	2	11	Right-handed alpha
Helix 32	AD5	C	32	55	Right-handed alpha
Helix 33	AD6	C	73	90	Right-handed alpha
Helix 34	AD7	C	99	131	Right-handed alpha
Helix 35	AD8	C	131	156	Right-handed alpha
Helix 36	AD9	C	193	205	Right-handed alpha
Helix 37	AE1	C	206	236	Right-handed alpha
Helix 38	AE2	C	237	240	Right-handed 310
Helix 39	AE3	C	249	255	Right-handed alpha
Helix 40	AE4	C	267	295	Right-handed alpha
Helix 41	AE5	C	295	300	Right-handed alpha
Helix 42	AE6	C	303	310	Right-handed alpha
Helix 43	AE7	C	325	339	Right-handed alpha
Helix 44	AE8	C	341	355	Right-handed alpha
Helix 45	AE9	C	363	369	Right-handed alpha
Helix 46	AF1	D	2	11	Right-handed alpha
Helix 47	AF2	D	32	55	Right-handed alpha
Helix 48	AF3	D	73	90	Right-handed alpha
Helix 49	AF4	D	99	131	Right-handed alpha
Helix 50	AF5	D	131	156	Right-handed alpha
Helix 51	AF6	D	193	205	Right-handed alpha
Helix 52	AF7	D	206	236	Right-handed alpha
Helix 53	AF8	D	237	240	Right-handed 310
Helix 54	AF9	D	249	255	Right-handed alpha
Helix 55	AG1	D	267	295	Right-handed alpha
Helix 56	AG2	D	295	300	Right-handed alpha
Helix 57	AG3	D	303	310	Right-handed alpha
Helix 58	AG4	D	325	339	Right-handed alpha
Helix 59	AG5	D	341	355	Right-handed alpha
Helix 60	AG6	D	363	369	Right-handed alpha
Helix 61	AG7	E	2	11	Right-handed alpha
Helix 62	AG8	E	32	55	Right-handed alpha
Helix 63	AG9	E	73	90	Right-handed alpha
Helix 64	AH1	E	99	131	Right-handed alpha
Helix 65	AH2	E	131	156	Right-handed alpha
Helix 66	AH3	E	193	205	Right-handed alpha
Helix 67	AH4	E	206	236	Right-handed alpha
Helix 68	AH5	E	237	240	Right-handed 310
Helix 69	AH6	E	249	255	Right-handed alpha
Helix 70	AH7	E	267	295	Right-handed alpha
Helix 71	AH8	E	295	300	Right-handed alpha
Helix 72	AH9	E	303	310	Right-handed alpha
Helix 73	AI1	E	325	339	Right-handed alpha
Helix 74	AI2	E	341	355	Right-handed alpha
Helix 75	AI3	E	363	369	Right-handed alpha
Helix 76	AI4	F	2	11	Right-handed alpha
Helix 77	AI5	F	32	55	Right-handed alpha
Helix 78	AI6	F	73	90	Right-handed alpha
Helix 79	AI7	F	99	131	Right-handed alpha
Helix 80	AI8	F	131	156	Right-handed alpha
Helix 81	AI9	F	193	205	Right-handed alpha
Helix 82	AJ1	F	206	236	Right-handed alpha
Helix 83	AJ2	F	237	240	Right-handed 310
Helix 84	AJ3	F	249	255	Right-handed alpha
Helix 85	AJ4	F	267	295	Right-handed alpha
Helix 86	AJ5	F	295	300	Right-handed alpha
Helix 87	AJ6	F	303	310	Right-handed alpha
Helix 88	AJ7	F	325	339	Right-handed alpha
Helix 89	AJ8	F	341	355	Right-handed alpha
Helix 90	AJ9	F	363	369	Right-handed alpha
Helix 91	AK1	G	2	11	Right-handed alpha
Helix 92	AK2	G	32	55	Right-handed alpha
Helix 93	AK3	G	73	90	Right-handed alpha
Helix 94	AK4	G	99	131	Right-handed alpha
Helix 95	AK5	G	131	156	Right-handed alpha
Helix 96	AK6	G	193	205	Right-handed alpha
Helix 97	AK7	G	206	236	Right-handed alpha
Helix 98	AK8	G	237	240	Right-handed 310
Helix 99	AK9	G	249	255	Right-handed alpha
Helix 100	AL1	G	267	295	Right-handed alpha
Helix 101	AL2	G	295	300	Right-handed alpha
Helix 102	AL3	G	303	310	Right-handed alpha
Helix 103	AL4	G	325	339	Right-handed alpha
Helix 104	AL5	G	341	355	Right-handed alpha
Helix 105	AL6	G	363	369	Right-handed alpha

There are 7 sheets in PDB entry 9HF1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	67	first strand
Strand 2	A	262	266	anti-parallel
Strand 3	A	242	245	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	67	first strand
Strand 2	B	262	266	anti-parallel
Strand 3	B	242	245	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	67	first strand
Strand 2	C	262	266	anti-parallel
Strand 3	C	242	245	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	67	first strand
Strand 2	D	262	266	anti-parallel
Strand 3	D	242	245	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	64	67	first strand
Strand 2	E	262	266	anti-parallel
Strand 3	E	242	245	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	64	67	first strand
Strand 2	F	262	266	anti-parallel
Strand 3	F	242	245	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	64	67	first strand
Strand 2	G	262	266	anti-parallel
Strand 3	G	242	245	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9HF1

Analysis of interatomic Contacts of Structural Units in PDB entry:
9HF1