Analysis of interatomic Contacts of Structural Units in PDB entry:
9HFZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HFZ entry

There are 8 chains in PDB entry 9HFZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 2ALA 467
B
VAL 2ALA 467
C
VAL 2ALA 467
D
VAL 2ALA 467
E
VAL 2ALA 467
F
VAL 2ALA 467
G
VAL 2ALA 467
H
VAL 2ALA 467
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are153 helices in PDB entry 9HFZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
15 17Right-handed 310
Helix 2
AA2
A
30 34Right-handed 310
Helix 3
AA3
A
58 68Right-handed alpha
Helix 4
AA4
A
79 92Right-handed alpha
Helix 5
AA5
A
108 117Right-handed alpha
Helix 6
AA6
A
137 142Right-handed alpha
Helix 7
AA7
A
149 153Right-handed 310
Helix 8
AA8
A
166 174Right-handed alpha
Helix 9
AA9
A
196 204Right-handed alpha
Helix 10
AB1
A
227 238Right-handed alpha
Helix 11
AB2
A
252 265Right-handed alpha
Helix 12
AB3
A
278 289Right-handed alpha
Helix 13
AB4
A
303 310Right-handed alpha
Helix 14
AB5
A
314 329Right-handed alpha
Helix 15
AB6
A
341 352Right-handed alpha
Helix 16
AB7
A
359 364Right-handed alpha
Helix 17
AB8
A
387 392Right-handed 310
Helix 18
AB9
A
402 412Right-handed alpha
Helix 19
AC1
A
428 448Right-handed alpha
Helix 20
AC2
A
451 459Right-handed alpha
Helix 21
AC3
B
30 34Right-handed 310
Helix 22
AC4
B
58 69Right-handed alpha
Helix 23
AC5
B
79 91Right-handed alpha
Helix 24
AC6
B
108 117Right-handed alpha
Helix 25
AC7
B
137 142Right-handed alpha
Helix 26
AC8
B
149 153Right-handed 310
Helix 27
AC9
B
166 174Right-handed alpha
Helix 28
AD1
B
196 203Right-handed alpha
Helix 29
AD2
B
227 238Right-handed alpha
Helix 30
AD3
B
252 264Right-handed alpha
Helix 31
AD4
B
278 289Right-handed alpha
Helix 32
AD5
B
303 310Right-handed alpha
Helix 33
AD6
B
314 329Right-handed alpha
Helix 34
AD7
B
341 351Right-handed alpha
Helix 35
AD8
B
359 364Right-handed 310
Helix 36
AD9
B
387 392Right-handed 310
Helix 37
AE1
B
402 412Right-handed alpha
Helix 38
AE2
B
428 448Right-handed alpha
Helix 39
AE3
B
451 459Right-handed alpha
Helix 40
AE4
C
30 34Right-handed 310
Helix 41
AE5
C
58 68Right-handed alpha
Helix 42
AE6
C
79 91Right-handed alpha
Helix 43
AE7
C
108 117Right-handed alpha
Helix 44
AE8
C
137 142Right-handed alpha
Helix 45
AE9
C
149 153Right-handed 310
Helix 46
AF1
C
166 174Right-handed alpha
Helix 47
AF2
C
196 204Right-handed alpha
Helix 48
AF3
C
227 238Right-handed alpha
Helix 49
AF4
C
252 264Right-handed alpha
Helix 50
AF5
C
278 288Right-handed alpha
Helix 51
AF6
C
303 310Right-handed alpha
Helix 52
AF7
C
314 329Right-handed alpha
Helix 53
AF8
C
341 351Right-handed alpha
Helix 54
AF9
C
359 364Right-handed 310
Helix 55
AG1
C
387 392Right-handed 310
Helix 56
AG2
C
402 412Right-handed alpha
Helix 57
AG3
C
428 448Right-handed alpha
Helix 58
AG4
C
451 459Right-handed alpha
Helix 59
AG5
D
30 34Right-handed 310
Helix 60
AG6
D
58 68Right-handed alpha
Helix 61
AG7
D
79 92Right-handed alpha
Helix 62
AG8
D
108 117Right-handed alpha
Helix 63
AG9
D
137 142Right-handed alpha
Helix 64
AH1
D
149 154Right-handed alpha
Helix 65
AH2
D
166 174Right-handed alpha
Helix 66
AH3
D
196 204Right-handed alpha
Helix 67
AH4
D
227 238Right-handed alpha
Helix 68
AH5
D
252 264Right-handed alpha
Helix 69
AH6
D
278 289Right-handed alpha
Helix 70
AH7
D
303 310Right-handed alpha
Helix 71
AH8
D
314 329Right-handed alpha
Helix 72
AH9
D
341 351Right-handed alpha
Helix 73
AI1
D
359 364Right-handed alpha
Helix 74
AI2
D
387 392Right-handed 310
Helix 75
AI3
D
402 412Right-handed alpha
Helix 76
AI4
D
428 448Right-handed alpha
Helix 77
AI5
D
451 459Right-handed alpha
Helix 78
AI6
E
30 34Right-handed 310
Helix 79
AI7
E
58 68Right-handed alpha
Helix 80
AI8
E
79 91Right-handed alpha
Helix 81
AI9
E
108 117Right-handed alpha
Helix 82
AJ1
E
137 142Right-handed alpha
Helix 83
AJ2
E
149 153Right-handed 310
Helix 84
AJ3
E
166 174Right-handed alpha
Helix 85
AJ4
E
196 206Right-handed alpha
Helix 86
AJ5
E
227 238Right-handed alpha
Helix 87
AJ6
E
252 264Right-handed alpha
Helix 88
AJ7
E
278 289Right-handed alpha
Helix 89
AJ8
E
303 310Right-handed alpha
Helix 90
AJ9
E
314 329Right-handed alpha
Helix 91
AK1
E
341 351Right-handed alpha
Helix 92
AK2
E
359 364Right-handed alpha
Helix 93
AK3
E
387 392Right-handed 310
Helix 94
AK4
E
402 411Right-handed alpha
Helix 95
AK5
E
428 448Right-handed alpha
Helix 96
AK6
E
451 459Right-handed alpha
Helix 97
AK7
F
30 34Right-handed 310
Helix 98
AK8
F
58 68Right-handed alpha
Helix 99
AK9
F
79 91Right-handed alpha
Helix 100
AL1
F
108 117Right-handed alpha
Helix 101
AL2
F
138 142Right-handed alpha
Helix 102
AL3
F
149 153Right-handed 310
Helix 103
AL4
F
166 174Right-handed alpha
Helix 104
AL5
F
196 206Right-handed alpha
Helix 105
AL6
F
227 238Right-handed alpha
Helix 106
AL7
F
252 265Right-handed alpha
Helix 107
AL8
F
278 289Right-handed alpha
Helix 108
AL9
F
303 310Right-handed alpha
Helix 109
AM1
F
314 329Right-handed alpha
Helix 110
AM2
F
341 351Right-handed alpha
Helix 111
AM3
F
359 364Right-handed 310
Helix 112
AM4
F
387 392Right-handed 310
Helix 113
AM5
F
402 411Right-handed alpha
Helix 114
AM6
F
428 448Right-handed alpha
Helix 115
AM7
F
451 459Right-handed alpha
Helix 116
AM8
G
30 34Right-handed 310
Helix 117
AM9
G
58 68Right-handed alpha
Helix 118
AN1
G
79 91Right-handed alpha
Helix 119
AN2
G
108 117Right-handed alpha
Helix 120
AN3
G
138 142Right-handed alpha
Helix 121
AN4
G
149 153Right-handed 310
Helix 122
AN5
G
166 174Right-handed alpha
Helix 123
AN6
G
196 206Right-handed alpha
Helix 124
AN7
G
227 238Right-handed alpha
Helix 125
AN8
G
252 264Right-handed alpha
Helix 126
AN9
G
278 289Right-handed alpha
Helix 127
AO1
G
303 310Right-handed alpha
Helix 128
AO2
G
314 329Right-handed alpha
Helix 129
AO3
G
341 351Right-handed alpha
Helix 130
AO4
G
359 364Right-handed alpha
Helix 131
AO5
G
387 392Right-handed 310
Helix 132
AO6
G
402 411Right-handed alpha
Helix 133
AO7
G
428 448Right-handed alpha
Helix 134
AO8
G
451 459Right-handed alpha
Helix 135
AO9
H
30 34Right-handed 310
Helix 136
AP1
H
58 68Right-handed alpha
Helix 137
AP2
H
79 91Right-handed alpha
Helix 138
AP3
H
108 117Right-handed alpha
Helix 139
AP4
H
137 142Right-handed alpha
Helix 140
AP5
H
149 154Right-handed alpha
Helix 141
AP6
H
166 174Right-handed alpha
Helix 142
AP7
H
196 204Right-handed alpha
Helix 143
AP8
H
227 238Right-handed alpha
Helix 144
AP9
H
252 264Right-handed alpha
Helix 145
AQ1
H
278 289Right-handed alpha
Helix 146
AQ2
H
303 310Right-handed alpha
Helix 147
AQ3
H
314 329Right-handed alpha
Helix 148
AQ4
H
341 352Right-handed alpha
Helix 149
AQ5
H
359 364Right-handed alpha
Helix 150
AQ6
H
387 392Right-handed 310
Helix 151
AQ7
H
402 412Right-handed alpha
Helix 152
AQ8
H
428 448Right-handed alpha
Helix 153
AQ9
H
451 459Right-handed alpha
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There are 40 sheets in PDB entry 9HFZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3 4first strand
Strand 2
A
460 463parallel
Strand 3
A
19 22anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
48 50first strand
Strand 2
A
71 74parallel
Strand 3
A
219 222parallel
Strand 4
A
242 246parallel
Strand 5
A
271 276parallel
Strand 6
A
292 295parallel
Strand 7
A
332 336parallel
Strand 8
A
355 358parallel
Strand 9
A
48 50parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
102 103first strand
Strand 2
A
124 128parallel
Strand 3
A
131 136anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
160 162first strand
Strand 2
A
182 185parallel
Strand 3
A
191 195anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
373 374first strand
Strand 2
A
380 385anti-parallel
Strand 3
A
417 421anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3 4first strand
Strand 2
B
460 463parallel
Strand 3
B
19 22anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
48 50first strand
Strand 2
B
71 74parallel
Strand 3
B
219 222parallel
Strand 4
B
243 246parallel
Strand 5
B
271 276parallel
Strand 6
B
292 295parallel
Strand 7
B
332 336parallel
Strand 8
B
355 358parallel
Strand 9
B
48 50parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
102 103first strand
Strand 2
B
124 128parallel
Strand 3
B
131 136anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
159 162first strand
Strand 2
B
182 185parallel
Strand 3
B
191 195anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
373 374first strand
Strand 2
B
380 385anti-parallel
Strand 3
B
417 421anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
3 4first strand
Strand 2
C
460 463parallel
Strand 3
C
19 22anti-parallel
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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
48 50first strand
Strand 2
C
71 74parallel
Strand 3
C
219 222parallel
Strand 4
C
242 246parallel
Strand 5
C
271 276parallel
Strand 6
C
292 295parallel
Strand 7
C
332 336parallel
Strand 8
C
355 358parallel
Strand 9
C
48 50parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
102 103first strand
Strand 2
C
124 128parallel
Strand 3
C
131 136anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
160 162first strand
Strand 2
C
182 185parallel
Strand 3
C
191 195anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
373 374first strand
Strand 2
C
380 385anti-parallel
Strand 3
C
417 421anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
3 4first strand
Strand 2
D
460 463parallel
Strand 3
D
19 21anti-parallel
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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
48 50first strand
Strand 2
D
71 74parallel
Strand 3
D
219 222parallel
Strand 4
D
242 246parallel
Strand 5
D
271 276parallel
Strand 6
D
292 295parallel
Strand 7
D
332 336parallel
Strand 8
D
355 358parallel
Strand 9
D
48 50parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
102 103first strand
Strand 2
D
124 128parallel
Strand 3
D
131 136anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
159 162first strand
Strand 2
D
182 185parallel
Strand 3
D
191 195anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
373 374first strand
Strand 2
D
380 385anti-parallel
Strand 3
D
417 421anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
3 4first strand
Strand 2
E
460 463parallel
Strand 3
E
19 22anti-parallel
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There are 9 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
48 50first strand
Strand 2
E
71 74parallel
Strand 3
E
219 222parallel
Strand 4
E
242 246parallel
Strand 5
E
271 276parallel
Strand 6
E
292 295parallel
Strand 7
E
332 336parallel
Strand 8
E
355 358parallel
Strand 9
E
48 50parallel
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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
102 103first strand
Strand 2
E
124 128parallel
Strand 3
E
131 136anti-parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
159 162first strand
Strand 2
E
182 185parallel
Strand 3
E
191 195anti-parallel
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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
373 374first strand
Strand 2
E
380 385anti-parallel
Strand 3
E
417 421anti-parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
3 4first strand
Strand 2
F
460 463parallel
Strand 3
F
19 22anti-parallel
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There are 9 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
48 50first strand
Strand 2
F
71 74parallel
Strand 3
F
219 222parallel
Strand 4
F
242 246parallel
Strand 5
F
271 276parallel
Strand 6
F
292 295parallel
Strand 7
F
332 336parallel
Strand 8
F
355 358parallel
Strand 9
F
48 50parallel
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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
102 103first strand
Strand 2
F
123 128parallel
Strand 3
F
131 137anti-parallel
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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
160 162first strand
Strand 2
F
182 185parallel
Strand 3
F
191 195anti-parallel
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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
373 374first strand
Strand 2
F
380 385anti-parallel
Strand 3
F
417 421anti-parallel
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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
3 4first strand
Strand 2
G
460 463parallel
Strand 3
G
19 21anti-parallel
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There are 9 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
48 50first strand
Strand 2
G
71 74parallel
Strand 3
G
219 222parallel
Strand 4
G
243 246parallel
Strand 5
G
271 276parallel
Strand 6
G
292 295parallel
Strand 7
G
332 336parallel
Strand 8
G
355 358parallel
Strand 9
G
48 50parallel
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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
102 103first strand
Strand 2
G
123 128parallel
Strand 3
G
131 137anti-parallel
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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
159 162first strand
Strand 2
G
182 185parallel
Strand 3
G
191 195anti-parallel
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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
373 374first strand
Strand 2
G
380 385anti-parallel
Strand 3
G
417 421anti-parallel
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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
3 4first strand
Strand 2
H
460 463parallel
Strand 3
H
19 22anti-parallel
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There are 8 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
71 72first strand
Strand 2
H
48 50parallel
Strand 3
H
355 358parallel
Strand 4
H
332 336parallel
Strand 5
H
292 295parallel
Strand 6
H
271 276parallel
Strand 7
H
243 245parallel
Strand 8
H
221 222parallel
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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
102 103first strand
Strand 2
H
124 128parallel
Strand 3
H
131 136anti-parallel
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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
160 162first strand
Strand 2
H
182 185parallel
Strand 3
H
191 195anti-parallel
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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
373 374first strand
Strand 2
H
380 385anti-parallel
Strand 3
H
417 421anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il