Analysis of interatomic Contacts of Structural Units in PDB entry:
9HG3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9HG3 entry

There are 8 chains in PDB entry 9HG3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 2	ALA 467
B	VAL 2	ALA 467
C	VAL 2	ALA 467
D	VAL 2	ALA 467
E	VAL 2	ALA 467
F	VAL 2	ALA 467
G	VAL 2	ALA 467
H	VAL 2	ALA 467

There are159 helices in PDB entry 9HG3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	34	Right-handed 310
Helix 2	AA2	A	58	68	Right-handed alpha
Helix 3	AA3	A	79	91	Right-handed alpha
Helix 4	AA4	A	108	116	Right-handed alpha
Helix 5	AA5	A	117	119	Right-handed 310
Helix 6	AA6	A	149	153	Right-handed 310
Helix 7	AA7	A	166	174	Right-handed alpha
Helix 8	AA8	A	196	204	Right-handed alpha
Helix 9	AA9	A	227	239	Right-handed alpha
Helix 10	AB1	A	252	265	Right-handed alpha
Helix 11	AB2	A	278	289	Right-handed alpha
Helix 12	AB3	A	303	310	Right-handed alpha
Helix 13	AB4	A	314	329	Right-handed alpha
Helix 14	AB5	A	341	352	Right-handed alpha
Helix 15	AB6	A	359	364	Right-handed 310
Helix 16	AB7	A	387	392	Right-handed 310
Helix 17	AB8	A	402	412	Right-handed alpha
Helix 18	AB9	A	428	448	Right-handed alpha
Helix 19	AC1	A	451	459	Right-handed alpha
Helix 20	AC2	B	30	34	Right-handed 310
Helix 21	AC3	B	58	68	Right-handed alpha
Helix 22	AC4	B	79	92	Right-handed alpha
Helix 23	AC5	B	108	116	Right-handed alpha
Helix 24	AC6	B	117	119	Right-handed 310
Helix 25	AC7	B	138	142	Right-handed alpha
Helix 26	AC8	B	149	153	Right-handed 310
Helix 27	AC9	B	166	174	Right-handed alpha
Helix 28	AD1	B	196	204	Right-handed alpha
Helix 29	AD2	B	227	239	Right-handed alpha
Helix 30	AD3	B	252	265	Right-handed alpha
Helix 31	AD4	B	278	288	Right-handed alpha
Helix 32	AD5	B	303	310	Right-handed alpha
Helix 33	AD6	B	314	329	Right-handed alpha
Helix 34	AD7	B	341	351	Right-handed alpha
Helix 35	AD8	B	359	364	Right-handed 310
Helix 36	AD9	B	387	392	Right-handed 310
Helix 37	AE1	B	402	412	Right-handed alpha
Helix 38	AE2	B	428	448	Right-handed alpha
Helix 39	AE3	B	451	459	Right-handed alpha
Helix 40	AE4	C	30	34	Right-handed 310
Helix 41	AE5	C	58	68	Right-handed alpha
Helix 42	AE6	C	79	92	Right-handed alpha
Helix 43	AE7	C	108	116	Right-handed alpha
Helix 44	AE8	C	117	119	Right-handed 310
Helix 45	AE9	C	138	142	Right-handed alpha
Helix 46	AF1	C	149	153	Right-handed 310
Helix 47	AF2	C	166	174	Right-handed alpha
Helix 48	AF3	C	196	204	Right-handed alpha
Helix 49	AF4	C	227	239	Right-handed alpha
Helix 50	AF5	C	252	265	Right-handed alpha
Helix 51	AF6	C	278	288	Right-handed alpha
Helix 52	AF7	C	303	310	Right-handed alpha
Helix 53	AF8	C	314	329	Right-handed alpha
Helix 54	AF9	C	341	352	Right-handed alpha
Helix 55	AG1	C	359	364	Right-handed 310
Helix 56	AG2	C	387	392	Right-handed 310
Helix 57	AG3	C	402	412	Right-handed alpha
Helix 58	AG4	C	428	448	Right-handed alpha
Helix 59	AG5	C	451	459	Right-handed alpha
Helix 60	AG6	D	30	34	Right-handed 310
Helix 61	AG7	D	58	68	Right-handed alpha
Helix 62	AG8	D	79	91	Right-handed alpha
Helix 63	AG9	D	108	116	Right-handed alpha
Helix 64	AH1	D	117	119	Right-handed 310
Helix 65	AH2	D	138	142	Right-handed alpha
Helix 66	AH3	D	149	153	Right-handed 310
Helix 67	AH4	D	166	174	Right-handed alpha
Helix 68	AH5	D	196	204	Right-handed alpha
Helix 69	AH6	D	227	239	Right-handed alpha
Helix 70	AH7	D	252	264	Right-handed alpha
Helix 71	AH8	D	278	288	Right-handed alpha
Helix 72	AH9	D	303	310	Right-handed alpha
Helix 73	AI1	D	314	329	Right-handed alpha
Helix 74	AI2	D	341	351	Right-handed alpha
Helix 75	AI3	D	359	364	Right-handed 310
Helix 76	AI4	D	387	392	Right-handed 310
Helix 77	AI5	D	402	412	Right-handed alpha
Helix 78	AI6	D	428	448	Right-handed alpha
Helix 79	AI7	D	451	459	Right-handed alpha
Helix 80	AI8	E	30	34	Right-handed 310
Helix 81	AI9	E	58	68	Right-handed alpha
Helix 82	AJ1	E	79	92	Right-handed alpha
Helix 83	AJ2	E	108	116	Right-handed alpha
Helix 84	AJ3	E	117	119	Right-handed 310
Helix 85	AJ4	E	138	142	Right-handed alpha
Helix 86	AJ5	E	149	153	Right-handed 310
Helix 87	AJ6	E	166	174	Right-handed alpha
Helix 88	AJ7	E	196	204	Right-handed alpha
Helix 89	AJ8	E	227	238	Right-handed alpha
Helix 90	AJ9	E	252	264	Right-handed alpha
Helix 91	AK1	E	278	289	Right-handed alpha
Helix 92	AK2	E	303	310	Right-handed alpha
Helix 93	AK3	E	314	329	Right-handed alpha
Helix 94	AK4	E	341	352	Right-handed alpha
Helix 95	AK5	E	359	364	Right-handed 310
Helix 96	AK6	E	387	392	Right-handed 310
Helix 97	AK7	E	402	410	Right-handed alpha
Helix 98	AK8	E	428	448	Right-handed alpha
Helix 99	AK9	E	451	459	Right-handed alpha
Helix 100	AL1	F	30	34	Right-handed 310
Helix 101	AL2	F	58	68	Right-handed alpha
Helix 102	AL3	F	79	91	Right-handed alpha
Helix 103	AL4	F	108	116	Right-handed alpha
Helix 104	AL5	F	117	119	Right-handed 310
Helix 105	AL6	F	138	142	Right-handed alpha
Helix 106	AL7	F	149	153	Right-handed 310
Helix 107	AL8	F	166	174	Right-handed alpha
Helix 108	AL9	F	196	206	Right-handed alpha
Helix 109	AM1	F	227	238	Right-handed alpha
Helix 110	AM2	F	252	266	Right-handed alpha
Helix 111	AM3	F	278	289	Right-handed alpha
Helix 112	AM4	F	303	310	Right-handed alpha
Helix 113	AM5	F	314	329	Right-handed alpha
Helix 114	AM6	F	341	351	Right-handed alpha
Helix 115	AM7	F	359	364	Right-handed 310
Helix 116	AM8	F	387	392	Right-handed 310
Helix 117	AM9	F	402	412	Right-handed alpha
Helix 118	AN1	F	428	448	Right-handed alpha
Helix 119	AN2	F	451	459	Right-handed alpha
Helix 120	AN3	G	30	34	Right-handed 310
Helix 121	AN4	G	58	68	Right-handed alpha
Helix 122	AN5	G	79	91	Right-handed alpha
Helix 123	AN6	G	108	116	Right-handed alpha
Helix 124	AN7	G	117	119	Right-handed 310
Helix 125	AN8	G	138	142	Right-handed alpha
Helix 126	AN9	G	149	153	Right-handed 310
Helix 127	AO1	G	166	174	Right-handed alpha
Helix 128	AO2	G	196	204	Right-handed alpha
Helix 129	AO3	G	227	239	Right-handed alpha
Helix 130	AO4	G	252	265	Right-handed alpha
Helix 131	AO5	G	278	288	Right-handed alpha
Helix 132	AO6	G	303	310	Right-handed alpha
Helix 133	AO7	G	314	329	Right-handed alpha
Helix 134	AO8	G	341	351	Right-handed alpha
Helix 135	AO9	G	359	364	Right-handed 310
Helix 136	AP1	G	387	392	Right-handed 310
Helix 137	AP2	G	402	412	Right-handed alpha
Helix 138	AP3	G	428	448	Right-handed alpha
Helix 139	AP4	G	451	459	Right-handed alpha
Helix 140	AP5	H	30	34	Right-handed 310
Helix 141	AP6	H	58	68	Right-handed alpha
Helix 142	AP7	H	79	91	Right-handed alpha
Helix 143	AP8	H	108	116	Right-handed alpha
Helix 144	AP9	H	117	119	Right-handed 310
Helix 145	AQ1	H	138	142	Right-handed alpha
Helix 146	AQ2	H	149	153	Right-handed 310
Helix 147	AQ3	H	168	174	Right-handed alpha
Helix 148	AQ4	H	196	204	Right-handed alpha
Helix 149	AQ5	H	227	239	Right-handed alpha
Helix 150	AQ6	H	252	265	Right-handed alpha
Helix 151	AQ7	H	278	289	Right-handed alpha
Helix 152	AQ8	H	303	310	Right-handed alpha
Helix 153	AQ9	H	314	329	Right-handed alpha
Helix 154	AR1	H	341	351	Right-handed alpha
Helix 155	AR2	H	359	364	Right-handed 310
Helix 156	AR3	H	387	392	Right-handed 310
Helix 157	AR4	H	402	412	Right-handed alpha
Helix 158	AR5	H	428	448	Right-handed alpha
Helix 159	AR6	H	451	459	Right-handed alpha

There are 40 sheets in PDB entry 9HG3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	4	first strand
Strand 2	A	460	463	parallel
Strand 3	A	19	22	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	50	first strand
Strand 2	A	71	74	parallel
Strand 3	A	219	222	parallel
Strand 4	A	243	246	parallel
Strand 5	A	271	276	parallel
Strand 6	A	292	295	parallel
Strand 7	A	332	336	parallel
Strand 8	A	355	358	parallel
Strand 9	A	48	50	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	103	first strand
Strand 2	A	123	128	parallel
Strand 3	A	131	137	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	162	first strand
Strand 2	A	182	185	parallel
Strand 3	A	191	195	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	373	374	first strand
Strand 2	A	380	385	anti-parallel
Strand 3	A	417	421	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	4	first strand
Strand 2	B	460	463	parallel
Strand 3	B	19	22	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	50	first strand
Strand 2	B	71	74	parallel
Strand 3	B	219	222	parallel
Strand 4	B	242	246	parallel
Strand 5	B	271	276	parallel
Strand 6	B	292	295	parallel
Strand 7	B	332	336	parallel
Strand 8	B	355	358	parallel
Strand 9	B	48	50	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	103	first strand
Strand 2	B	123	128	parallel
Strand 3	B	131	137	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	162	first strand
Strand 2	B	182	185	parallel
Strand 3	B	191	195	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	373	374	first strand
Strand 2	B	380	385	anti-parallel
Strand 3	B	417	421	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	4	first strand
Strand 2	C	460	463	parallel
Strand 3	C	19	22	anti-parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	50	first strand
Strand 2	C	71	74	parallel
Strand 3	C	219	222	parallel
Strand 4	C	242	246	parallel
Strand 5	C	271	276	parallel
Strand 6	C	292	295	parallel
Strand 7	C	332	336	parallel
Strand 8	C	355	358	parallel
Strand 9	C	48	50	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	103	first strand
Strand 2	C	123	128	parallel
Strand 3	C	131	137	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	162	first strand
Strand 2	C	182	185	parallel
Strand 3	C	191	195	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	373	374	first strand
Strand 2	C	380	385	anti-parallel
Strand 3	C	417	421	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	4	first strand
Strand 2	D	460	463	parallel
Strand 3	D	19	22	anti-parallel

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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	50	first strand
Strand 2	D	71	74	parallel
Strand 3	D	219	222	parallel
Strand 4	D	242	246	parallel
Strand 5	D	271	276	parallel
Strand 6	D	292	295	parallel
Strand 7	D	332	336	parallel
Strand 8	D	355	358	parallel
Strand 9	D	48	50	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	103	first strand
Strand 2	D	123	128	parallel
Strand 3	D	131	137	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	162	first strand
Strand 2	D	182	185	parallel
Strand 3	D	191	195	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	373	374	first strand
Strand 2	D	380	385	anti-parallel
Strand 3	D	417	421	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	4	first strand
Strand 2	E	460	463	parallel
Strand 3	E	19	22	anti-parallel

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There are 9 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	48	50	first strand
Strand 2	E	71	74	parallel
Strand 3	E	219	222	parallel
Strand 4	E	242	246	parallel
Strand 5	E	271	276	parallel
Strand 6	E	292	295	parallel
Strand 7	E	332	336	parallel
Strand 8	E	355	358	parallel
Strand 9	E	48	50	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	101	103	first strand
Strand 2	E	123	128	parallel
Strand 3	E	131	137	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	159	162	first strand
Strand 2	E	182	185	parallel
Strand 3	E	191	195	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	373	374	first strand
Strand 2	E	380	385	anti-parallel
Strand 3	E	417	421	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	4	first strand
Strand 2	F	460	463	parallel
Strand 3	F	19	22	anti-parallel

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There are 9 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	48	50	first strand
Strand 2	F	71	74	parallel
Strand 3	F	219	223	parallel
Strand 4	F	242	246	parallel
Strand 5	F	271	276	parallel
Strand 6	F	292	295	parallel
Strand 7	F	332	336	parallel
Strand 8	F	355	358	parallel
Strand 9	F	48	50	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	101	103	first strand
Strand 2	F	123	128	parallel
Strand 3	F	131	137	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	159	162	first strand
Strand 2	F	182	185	parallel
Strand 3	F	191	195	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	373	374	first strand
Strand 2	F	380	385	anti-parallel
Strand 3	F	417	421	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	4	first strand
Strand 2	G	460	463	parallel
Strand 3	G	19	22	anti-parallel

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There are 9 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	48	50	first strand
Strand 2	G	71	74	parallel
Strand 3	G	219	222	parallel
Strand 4	G	242	246	parallel
Strand 5	G	271	276	parallel
Strand 6	G	292	295	parallel
Strand 7	G	332	336	parallel
Strand 8	G	355	358	parallel
Strand 9	G	48	50	parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	101	103	first strand
Strand 2	G	123	128	parallel
Strand 3	G	131	137	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	159	162	first strand
Strand 2	G	182	185	parallel
Strand 3	G	191	195	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	373	374	first strand
Strand 2	G	380	385	anti-parallel
Strand 3	G	417	421	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	4	first strand
Strand 2	H	460	463	parallel
Strand 3	H	19	22	anti-parallel

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There are 9 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	48	50	first strand
Strand 2	H	71	74	parallel
Strand 3	H	219	222	parallel
Strand 4	H	242	246	parallel
Strand 5	H	271	276	parallel
Strand 6	H	292	295	parallel
Strand 7	H	332	336	parallel
Strand 8	H	355	358	parallel
Strand 9	H	48	50	parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	101	103	first strand
Strand 2	H	123	128	parallel
Strand 3	H	131	137	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	159	162	first strand
Strand 2	H	182	185	parallel
Strand 3	H	191	195	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	373	374	first strand
Strand 2	H	380	385	anti-parallel
Strand 3	H	417	421	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9HG3

Analysis of interatomic Contacts of Structural Units in PDB entry:
9HG3