Analysis of interatomic Contacts of Structural Units in PDB entry:
9HGQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HGQ entry

There are 2 chains in PDB entry 9HGQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR -3GLN 282
B
 SER 0LYS 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9HGQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 14Right-handed alpha
Helix 2
AA2
A
24 35Right-handed alpha
Helix 3
AA3
A
42 50Right-handed alpha
Helix 4
AA4
A
59 74Right-handed alpha
Helix 5
AA5
A
88 102Right-handed alpha
Helix 6
AA6
A
128 141Right-handed alpha
Helix 7
AA7
A
155 160Right-handed alpha
Helix 8
AA8
A
160 174Right-handed alpha
Helix 9
AA9
A
186 188Right-handed 310
Helix 10
AB1
A
189 198Right-handed alpha
Helix 11
AB2
A
215 222Right-handed alpha
Helix 12
AB3
A
231 252Right-handed alpha
Helix 13
AB4
A
254 261Right-handed 310
Helix 14
AB5
A
263 272Right-handed alpha
Helix 15
AB6
A
273 278Right-handed alpha
Helix 16
AB7
B
2 14Right-handed alpha
Helix 17
AB8
B
24 35Right-handed alpha
Helix 18
AB9
B
42 50Right-handed alpha
Helix 19
AC1
B
59 72Right-handed alpha
Helix 20
AC2
B
88 102Right-handed alpha
Helix 21
AC3
B
128 141Right-handed alpha
Helix 22
AC4
B
155 160Right-handed alpha
Helix 23
AC5
B
160 174Right-handed alpha
Helix 24
AC6
B
186 188Right-handed 310
Helix 25
AC7
B
189 198Right-handed alpha
Helix 26
AC8
B
215 222Right-handed alpha
Helix 27
AC9
B
231 252Right-handed alpha
Helix 28
AD1
B
254 261Right-handed 310
Helix 29
AD2
B
263 272Right-handed alpha
Helix 30
AD3
B
272 284Right-handed alpha
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There are 2 sheets in PDB entry 9HGQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 21first strand
Strand 2
A
38 41parallel
Strand 3
A
78 81parallel
Strand 4
A
106 110parallel
Strand 5
A
148 152parallel
Strand 6
A
178 182parallel
Strand 7
A
201 204parallel
Strand 8
A
226 229parallel
Strand 9
A
17 21parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 21first strand
Strand 2
B
38 41parallel
Strand 3
B
78 81parallel
Strand 4
B
106 110parallel
Strand 5
B
148 153parallel
Strand 6
B
178 181parallel
Strand 7
B
201 204parallel
Strand 8
B
226 229parallel
Strand 9
B
17 21parallel
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