Analysis of interatomic Contacts of Structural Units in PDB entry:
9HGZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HGZ entry

There are 3 chains in PDB entry 9HGZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 4VAL 529
B
 ASP 3VAL 529
C
 ILE 4TRP 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 95 helices in PDB entry 9HGZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 42Right-handed 310
Helix 2
AA2
A
76 81Right-handed alpha
Helix 3
AA3
A
125 129Right-handed 310
Helix 4
AA4
A
130 138Right-handed alpha
Helix 5
AA5
A
149 154Right-handed alpha
Helix 6
AA6
A
165 182Right-handed alpha
Helix 7
AA7
A
183 185Right-handed 310
Helix 8
AA8
A
198 208Right-handed alpha
Helix 9
AA9
A
209 217Right-handed 310
Helix 10
AB1
A
235 251Right-handed alpha
Helix 11
AB2
A
256 258Right-handed 310
Helix 12
AB3
A
259 266Right-handed alpha
Helix 13
AB4
A
268 277Right-handed alpha
Helix 14
AB5
A
278 280Right-handed 310
Helix 15
AB6
A
302 309Right-handed alpha
Helix 16
AB7
A
326 331Right-handed alpha
Helix 17
AB8
A
346 358Right-handed alpha
Helix 18
AB9
A
362 374Right-handed alpha
Helix 19
AC1
A
383 398Right-handed alpha
Helix 20
AC2
A
398 412Right-handed alpha
Helix 21
AC3
A
431 435Right-handed 310
Helix 22
AC4
A
441 446Right-handed alpha
Helix 23
AC5
A
447 455Right-handed 310
Helix 24
AC6
A
457 478Right-handed alpha
Helix 25
AC7
A
515 525Right-handed alpha
Helix 26
AC8
A
526 529Right-handed 310
Helix 27
AC9
B
38 42Right-handed 310
Helix 28
AD1
B
76 81Right-handed alpha
Helix 29
AD2
B
125 129Right-handed 310
Helix 30
AD3
B
130 137Right-handed alpha
Helix 31
AD4
B
149 154Right-handed alpha
Helix 32
AD5
B
165 182Right-handed alpha
Helix 33
AD6
B
183 185Right-handed 310
Helix 34
AD7
B
198 209Right-handed alpha
Helix 35
AD8
B
210 217Right-handed 310
Helix 36
AD9
B
235 251Right-handed alpha
Helix 37
AE1
B
256 266Right-handed alpha
Helix 38
AE2
B
268 277Right-handed alpha
Helix 39
AE3
B
302 309Right-handed alpha
Helix 40
AE4
B
326 331Right-handed alpha
Helix 41
AE5
B
346 358Right-handed alpha
Helix 42
AE6
B
362 374Right-handed alpha
Helix 43
AE7
B
383 398Right-handed alpha
Helix 44
AE8
B
398 411Right-handed alpha
Helix 45
AE9
B
431 435Right-handed 310
Helix 46
AF1
B
441 446Right-handed alpha
Helix 47
AF2
B
447 451Right-handed 310
Helix 48
AF3
B
457 478Right-handed alpha
Helix 49
AF4
B
515 525Right-handed alpha
Helix 50
AF5
B
526 529Right-handed 310
Helix 51
AF6
C
38 42Right-handed 310
Helix 52
AF7
C
76 81Right-handed alpha
Helix 53
AF8
C
125 129Right-handed 310
Helix 54
AF9
C
130 138Right-handed alpha
Helix 55
AG1
C
149 154Right-handed alpha
Helix 56
AG2
C
165 182Right-handed alpha
Helix 57
AG3
C
183 185Right-handed 310
Helix 58
AG4
C
198 208Right-handed alpha
Helix 59
AG5
C
209 217Right-handed 310
Helix 60
AG6
C
235 251Right-handed alpha
Helix 61
AG7
C
257 266Right-handed alpha
Helix 62
AG8
C
268 277Right-handed alpha
Helix 63
AG9
C
302 310Right-handed alpha
Helix 64
AH1
C
326 334Right-handed alpha
Helix 65
AH2
C
346 358Right-handed alpha
Helix 66
AH3
C
362 374Right-handed alpha
Helix 67
AH4
C
383 398Right-handed alpha
Helix 68
AH5
C
398 412Right-handed alpha
Helix 69
AH6
C
431 435Right-handed 310
Helix 70
AH7
C
441 446Right-handed alpha
Helix 71
AH8
C
447 451Right-handed 310
Helix 72
AH9
C
457 478Right-handed alpha
Helix 73
AI1
C
515 525Right-handed alpha
Helix 74
AI2
C
526 529Right-handed 310
Helix 75
AI3
D
76 81Right-handed alpha
Helix 76
AI4
D
130 137Right-handed alpha
Helix 77
AI5
D
149 154Right-handed alpha
Helix 78
AI6
D
165 186Right-handed alpha
Helix 79
AI7
D
198 210Right-handed alpha
Helix 80
AI8
D
211 217Right-handed 310
Helix 81
AI9
D
235 249Right-handed alpha
Helix 82
AJ1
D
256 266Right-handed alpha
Helix 83
AJ2
D
268 277Right-handed alpha
Helix 84
AJ3
D
302 309Right-handed alpha
Helix 85
AJ4
D
326 331Right-handed alpha
Helix 86
AJ5
D
346 358Right-handed alpha
Helix 87
AJ6
D
362 374Right-handed alpha
Helix 88
AJ7
D
383 398Right-handed alpha
Helix 89
AJ8
D
398 411Right-handed alpha
Helix 90
AJ9
D
431 435Right-handed 310
Helix 91
AK1
D
441 447Right-handed alpha
Helix 92
AK2
D
448 455Right-handed 310
Helix 93
AK3
D
457 478Right-handed alpha
Helix 94
AK4
D
515 525Right-handed alpha
Helix 95
AK5
D
526 529Right-handed 310
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There are 7 sheets in PDB entry 9HGZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 7first strand
Strand 2
A
12 14anti-parallel
Strand 3
A
55 56parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 20first strand
Strand 2
A
23 32anti-parallel
Strand 3
A
94 100anti-parallel
Strand 4
A
140 144anti-parallel
Strand 5
A
107 113parallel
Strand 6
A
187 197parallel
Strand 7
A
219 223parallel
Strand 8
A
317 322parallel
Strand 9
A
416 421parallel
Strand 10
A
499 503parallel
Strand 11
A
510 512anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 8first strand
Strand 2
B
11 14anti-parallel
Strand 3
B
55 57parallel
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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 20first strand
Strand 2
B
23 32anti-parallel
Strand 3
B
94 100anti-parallel
Strand 4
B
140 144anti-parallel
Strand 5
B
107 113parallel
Strand 6
B
187 197parallel
Strand 7
B
219 223parallel
Strand 8
B
317 322parallel
Strand 9
B
416 421parallel
Strand 10
B
499 503parallel
Strand 11
B
510 512anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 7first strand
Strand 2
C
12 14anti-parallel
Strand 3
C
56 57parallel
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There are 11 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 19first strand
Strand 2
C
24 32anti-parallel
Strand 3
C
94 100anti-parallel
Strand 4
C
140 144anti-parallel
Strand 5
C
107 113parallel
Strand 6
C
187 197parallel
Strand 7
C
219 223parallel
Strand 8
C
317 322parallel
Strand 9
C
416 421parallel
Strand 10
C
499 503parallel
Strand 11
C
510 512anti-parallel
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There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
16 20first strand
Strand 2
D
23 32anti-parallel
Strand 3
D
94 100anti-parallel
Strand 4
D
140 144anti-parallel
Strand 5
D
107 113parallel
Strand 6
D
187 197parallel
Strand 7
D
219 223parallel
Strand 8
D
317 322parallel
Strand 9
D
416 421parallel
Strand 10
D
499 503parallel
Strand 11
D
510 512anti-parallel
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