Analysis of interatomic Contacts of Structural Units in PDB entry:
9HH0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HH0 entry

There are 3 chains in PDB entry 9HH0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 4VAL 529
B
 ASP 3VAL 529
C
 ILE 4LEU 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 97 helices in PDB entry 9HH0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 42Right-handed 310
Helix 2
AA2
A
76 81Right-handed alpha
Helix 3
AA3
A
125 129Right-handed 310
Helix 4
AA4
A
130 138Right-handed alpha
Helix 5
AA5
A
148 154Right-handed alpha
Helix 6
AA6
A
165 186Right-handed alpha
Helix 7
AA7
A
198 208Right-handed alpha
Helix 8
AA8
A
209 217Right-handed 310
Helix 9
AA9
A
235 251Right-handed alpha
Helix 10
AB1
A
256 266Right-handed alpha
Helix 11
AB2
A
268 277Right-handed alpha
Helix 12
AB3
A
278 280Right-handed 310
Helix 13
AB4
A
302 309Right-handed alpha
Helix 14
AB5
A
326 331Right-handed alpha
Helix 15
AB6
A
346 358Right-handed alpha
Helix 16
AB7
A
362 374Right-handed alpha
Helix 17
AB8
A
383 398Right-handed alpha
Helix 18
AB9
A
398 412Right-handed alpha
Helix 19
AC1
A
431 435Right-handed 310
Helix 20
AC2
A
441 446Right-handed alpha
Helix 21
AC3
A
447 455Right-handed 310
Helix 22
AC4
A
457 478Right-handed alpha
Helix 23
AC5
A
515 525Right-handed alpha
Helix 24
AC6
A
526 529Right-handed 310
Helix 25
AC7
B
38 42Right-handed 310
Helix 26
AC8
B
76 81Right-handed alpha
Helix 27
AC9
B
125 129Right-handed 310
Helix 28
AD1
B
130 138Right-handed alpha
Helix 29
AD2
B
148 154Right-handed alpha
Helix 30
AD3
B
165 182Right-handed alpha
Helix 31
AD4
B
183 185Right-handed 310
Helix 32
AD5
B
198 208Right-handed alpha
Helix 33
AD6
B
210 217Right-handed 310
Helix 34
AD7
B
235 251Right-handed alpha
Helix 35
AD8
B
256 265Right-handed alpha
Helix 36
AD9
B
268 277Right-handed alpha
Helix 37
AE1
B
302 309Right-handed alpha
Helix 38
AE2
B
326 331Right-handed alpha
Helix 39
AE3
B
346 358Right-handed alpha
Helix 40
AE4
B
362 374Right-handed alpha
Helix 41
AE5
B
383 398Right-handed alpha
Helix 42
AE6
B
398 411Right-handed alpha
Helix 43
AE7
B
431 435Right-handed 310
Helix 44
AE8
B
441 446Right-handed alpha
Helix 45
AE9
B
447 455Right-handed 310
Helix 46
AF1
B
457 478Right-handed alpha
Helix 47
AF2
B
515 525Right-handed alpha
Helix 48
AF3
B
526 529Right-handed 310
Helix 49
AF4
C
38 42Right-handed 310
Helix 50
AF5
C
76 81Right-handed alpha
Helix 51
AF6
C
125 129Right-handed 310
Helix 52
AF7
C
130 138Right-handed alpha
Helix 53
AF8
C
149 154Right-handed alpha
Helix 54
AF9
C
165 182Right-handed alpha
Helix 55
AG1
C
183 185Right-handed 310
Helix 56
AG2
C
198 208Right-handed alpha
Helix 57
AG3
C
210 217Right-handed 310
Helix 58
AG4
C
235 250Right-handed alpha
Helix 59
AG5
C
257 266Right-handed alpha
Helix 60
AG6
C
268 276Right-handed alpha
Helix 61
AG7
C
277 279Right-handed 310
Helix 62
AG8
C
302 309Right-handed alpha
Helix 63
AG9
C
326 334Right-handed alpha
Helix 64
AH1
C
346 358Right-handed alpha
Helix 65
AH2
C
362 374Right-handed alpha
Helix 66
AH3
C
383 398Right-handed alpha
Helix 67
AH4
C
398 412Right-handed alpha
Helix 68
AH5
C
431 435Right-handed 310
Helix 69
AH6
C
441 446Right-handed alpha
Helix 70
AH7
C
447 451Right-handed 310
Helix 71
AH8
C
457 478Right-handed alpha
Helix 72
AH9
C
515 525Right-handed alpha
Helix 73
AI1
C
526 529Right-handed 310
Helix 74
AI2
D
38 42Right-handed 310
Helix 75
AI3
D
76 81Right-handed alpha
Helix 76
AI4
D
125 129Right-handed 310
Helix 77
AI5
D
130 138Right-handed alpha
Helix 78
AI6
D
149 154Right-handed alpha
Helix 79
AI7
D
165 182Right-handed alpha
Helix 80
AI8
D
183 185Right-handed 310
Helix 81
AI9
D
198 208Right-handed alpha
Helix 82
AJ1
D
210 217Right-handed 310
Helix 83
AJ2
D
235 249Right-handed alpha
Helix 84
AJ3
D
256 267Right-handed alpha
Helix 85
AJ4
D
268 275Right-handed alpha
Helix 86
AJ5
D
302 309Right-handed alpha
Helix 87
AJ6
D
326 331Right-handed alpha
Helix 88
AJ7
D
346 358Right-handed alpha
Helix 89
AJ8
D
362 374Right-handed alpha
Helix 90
AJ9
D
383 398Right-handed alpha
Helix 91
AK1
D
398 411Right-handed alpha
Helix 92
AK2
D
431 435Right-handed 310
Helix 93
AK3
D
441 446Right-handed alpha
Helix 94
AK4
D
447 455Right-handed 310
Helix 95
AK5
D
457 478Right-handed alpha
Helix 96
AK6
D
515 525Right-handed alpha
Helix 97
AK7
D
526 529Right-handed 310
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There are 7 sheets in PDB entry 9HH0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 7first strand
Strand 2
A
12 14anti-parallel
Strand 3
A
55 57parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 20first strand
Strand 2
A
23 32anti-parallel
Strand 3
A
94 100anti-parallel
Strand 4
A
140 144anti-parallel
Strand 5
A
107 113parallel
Strand 6
A
187 197parallel
Strand 7
A
219 223parallel
Strand 8
A
317 322parallel
Strand 9
A
416 421parallel
Strand 10
A
499 503parallel
Strand 11
A
510 512anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 7first strand
Strand 2
B
12 14anti-parallel
Strand 3
B
55 56parallel
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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 20first strand
Strand 2
B
23 32anti-parallel
Strand 3
B
94 100anti-parallel
Strand 4
B
140 144anti-parallel
Strand 5
B
107 113parallel
Strand 6
B
187 197parallel
Strand 7
B
219 223parallel
Strand 8
B
317 322parallel
Strand 9
B
416 421parallel
Strand 10
B
499 503parallel
Strand 11
B
510 512anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 8first strand
Strand 2
C
11 14anti-parallel
Strand 3
C
56 57parallel
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There are 11 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 19first strand
Strand 2
C
24 32anti-parallel
Strand 3
C
94 100anti-parallel
Strand 4
C
140 144anti-parallel
Strand 5
C
107 113parallel
Strand 6
C
187 197parallel
Strand 7
C
219 223parallel
Strand 8
C
317 322parallel
Strand 9
C
416 421parallel
Strand 10
C
499 503parallel
Strand 11
C
510 512anti-parallel
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There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
16 20first strand
Strand 2
D
23 32anti-parallel
Strand 3
D
94 100anti-parallel
Strand 4
D
140 144anti-parallel
Strand 5
D
107 113parallel
Strand 6
D
187 197parallel
Strand 7
D
219 223parallel
Strand 8
D
317 322parallel
Strand 9
D
416 421parallel
Strand 10
D
499 503parallel
Strand 11
D
510 512anti-parallel
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