Analysis of interatomic Contacts of Structural Units in PDB entry:
9HHE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9HHE entry

There are 2 chains in PDB entry 9HHE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLN 3SER 591
A
 GLN 3SER 591
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 9HHE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
4 9Right-handed alpha
Helix 2
AA2
B
24 33Right-handed alpha
Helix 3
AA3
B
60 71Right-handed alpha
Helix 4
AA4
B
81 97Right-handed alpha
Helix 5
AA5
B
104 116Right-handed alpha
Helix 6
AA6
B
117 148Right-handed alpha
Helix 7
AA7
B
155 176Right-handed alpha
Helix 8
AA8
B
176 189Right-handed alpha
Helix 9
AA9
B
207 217Right-handed alpha
Helix 10
AB1
B
218 245Right-handed alpha
Helix 11
AB2
B
251 256Right-handed alpha
Helix 12
AB3
B
257 278Right-handed alpha
Helix 13
AB4
B
278 287Right-handed alpha
Helix 14
AB5
B
290 320Right-handed alpha
Helix 15
AB6
B
325 330Right-handed alpha
Helix 16
AB7
B
331 336Right-handed alpha
Helix 17
AB8
B
358 369Right-handed alpha
Helix 18
AB9
B
369 394Right-handed alpha
Helix 19
AC1
B
402 411Right-handed alpha
Helix 20
AC2
B
413 429Right-handed alpha
Helix 21
AC3
B
430 433Right-handed 310
Helix 22
AC4
B
436 455Right-handed alpha
Helix 23
AC5
B
460 483Right-handed alpha
Helix 24
AC6
B
509 534Right-handed alpha
Helix 25
AC7
B
552 556Right-handed 310
Helix 26
AC8
B
562 591Right-handed alpha
Helix 27
AC9
A
4 9Right-handed alpha
Helix 28
AD1
A
24 33Right-handed alpha
Helix 29
AD2
A
60 71Right-handed alpha
Helix 30
AD3
A
81 97Right-handed alpha
Helix 31
AD4
A
104 116Right-handed alpha
Helix 32
AD5
A
117 147Right-handed alpha
Helix 33
AD6
A
155 176Right-handed alpha
Helix 34
AD7
A
177 189Right-handed alpha
Helix 35
AD8
A
207 217Right-handed alpha
Helix 36
AD9
A
218 245Right-handed alpha
Helix 37
AE1
A
251 256Right-handed alpha
Helix 38
AE2
A
257 278Right-handed alpha
Helix 39
AE3
A
278 287Right-handed alpha
Helix 40
AE4
A
290 320Right-handed alpha
Helix 41
AE5
A
331 336Right-handed alpha
Helix 42
AE6
A
358 369Right-handed alpha
Helix 43
AE7
A
369 394Right-handed alpha
Helix 44
AE8
A
401 411Right-handed alpha
Helix 45
AE9
A
413 429Right-handed alpha
Helix 46
AF1
A
430 433Right-handed 310
Helix 47
AF2
A
436 455Right-handed alpha
Helix 48
AF3
A
460 483Right-handed alpha
Helix 49
AF4
A
509 534Right-handed alpha
Helix 50
AF5
A
552 556Right-handed 310
Helix 51
AF6
A
562 591Right-handed alpha
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There are 2 sheets in PDB entry 9HHE. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 42first strand
Strand 2
B
48 53anti-parallel
Strand 3
B
12 17anti-parallel
Strand 4
B
73 77anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
48 53anti-parallel
Strand 3
A
12 17anti-parallel
Strand 4
A
73 77anti-parallel
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