Analysis of interatomic Contacts of Structural Units in PDB entry:
9HHY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9HHY entry

There are 12 chains in PDB entry 9HHY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR -3	LYS 287
B	GLN -1	LYS 285
C	GLN -1	ARG 286
D	LEU -4	LYS 287
E	PHE -2	LEU 283
F	SER 0	ARG 286
G	SER 0	LYS 285
H	SER 0	ARG 286
I	TYR -3	LYS 285
J	GLN -1	ARG 286
K	GLN -1	ARG 286
L	SER 0	ARG 286

There are169 helices in PDB entry 9HHY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	14	Right-handed alpha
Helix 2	AA2	A	24	35	Right-handed alpha
Helix 3	AA3	A	42	50	Right-handed alpha
Helix 4	AA4	A	59	72	Right-handed alpha
Helix 5	AA5	A	88	102	Right-handed alpha
Helix 6	AA6	A	128	141	Right-handed alpha
Helix 7	AA7	A	155	175	Right-handed alpha
Helix 8	AA8	A	186	188	Right-handed 310
Helix 9	AA9	A	189	198	Right-handed alpha
Helix 10	AB1	A	215	222	Right-handed alpha
Helix 11	AB2	A	231	252	Right-handed alpha
Helix 12	AB3	A	254	261	Right-handed 310
Helix 13	AB4	A	263	272	Right-handed alpha
Helix 14	AB5	A	272	285	Right-handed alpha
Helix 15	AB6	B	2	14	Right-handed alpha
Helix 16	AB7	B	24	35	Right-handed alpha
Helix 17	AB8	B	42	50	Right-handed alpha
Helix 18	AB9	B	59	72	Right-handed alpha
Helix 19	AC1	B	88	102	Right-handed alpha
Helix 20	AC2	B	128	141	Right-handed alpha
Helix 21	AC3	B	155	175	Right-handed alpha
Helix 22	AC4	B	186	188	Right-handed 310
Helix 23	AC5	B	189	198	Right-handed alpha
Helix 24	AC6	B	215	222	Right-handed alpha
Helix 25	AC7	B	231	252	Right-handed alpha
Helix 26	AC8	B	254	261	Right-handed 310
Helix 27	AC9	B	263	272	Right-handed alpha
Helix 28	AD1	B	272	285	Right-handed alpha
Helix 29	AD2	C	2	14	Right-handed alpha
Helix 30	AD3	C	24	35	Right-handed alpha
Helix 31	AD4	C	42	50	Right-handed alpha
Helix 32	AD5	C	59	72	Right-handed alpha
Helix 33	AD6	C	88	102	Right-handed alpha
Helix 34	AD7	C	128	141	Right-handed alpha
Helix 35	AD8	C	155	175	Right-handed alpha
Helix 36	AD9	C	186	188	Right-handed 310
Helix 37	AE1	C	189	198	Right-handed alpha
Helix 38	AE2	C	215	222	Right-handed alpha
Helix 39	AE3	C	231	252	Right-handed alpha
Helix 40	AE4	C	254	261	Right-handed 310
Helix 41	AE5	C	263	272	Right-handed alpha
Helix 42	AE6	C	272	285	Right-handed alpha
Helix 43	AE7	D	-3	1	Right-handed alpha
Helix 44	AE8	D	2	14	Right-handed alpha
Helix 45	AE9	D	24	35	Right-handed alpha
Helix 46	AF1	D	42	50	Right-handed alpha
Helix 47	AF2	D	59	72	Right-handed alpha
Helix 48	AF3	D	88	102	Right-handed alpha
Helix 49	AF4	D	128	141	Right-handed alpha
Helix 50	AF5	D	155	175	Right-handed alpha
Helix 51	AF6	D	186	188	Right-handed 310
Helix 52	AF7	D	189	198	Right-handed alpha
Helix 53	AF8	D	215	222	Right-handed alpha
Helix 54	AF9	D	231	252	Right-handed alpha
Helix 55	AG1	D	254	261	Right-handed 310
Helix 56	AG2	D	263	272	Right-handed alpha
Helix 57	AG3	D	272	286	Right-handed alpha
Helix 58	AG4	E	2	14	Right-handed alpha
Helix 59	AG5	E	24	35	Right-handed alpha
Helix 60	AG6	E	42	50	Right-handed alpha
Helix 61	AG7	E	59	72	Right-handed alpha
Helix 62	AG8	E	88	102	Right-handed alpha
Helix 63	AG9	E	128	141	Right-handed alpha
Helix 64	AH1	E	155	175	Right-handed alpha
Helix 65	AH2	E	186	188	Right-handed 310
Helix 66	AH3	E	189	198	Right-handed alpha
Helix 67	AH4	E	215	222	Right-handed alpha
Helix 68	AH5	E	231	252	Right-handed alpha
Helix 69	AH6	E	254	261	Right-handed 310
Helix 70	AH7	E	263	272	Right-handed alpha
Helix 71	AH8	E	272	283	Right-handed alpha
Helix 72	AH9	F	2	14	Right-handed alpha
Helix 73	AI1	F	24	35	Right-handed alpha
Helix 74	AI2	F	42	50	Right-handed alpha
Helix 75	AI3	F	59	72	Right-handed alpha
Helix 76	AI4	F	88	102	Right-handed alpha
Helix 77	AI5	F	128	141	Right-handed alpha
Helix 78	AI6	F	155	175	Right-handed alpha
Helix 79	AI7	F	186	188	Right-handed 310
Helix 80	AI8	F	189	198	Right-handed alpha
Helix 81	AI9	F	215	222	Right-handed alpha
Helix 82	AJ1	F	231	252	Right-handed alpha
Helix 83	AJ2	F	254	261	Right-handed 310
Helix 84	AJ3	F	263	272	Right-handed alpha
Helix 85	AJ4	F	272	285	Right-handed alpha
Helix 86	AJ5	G	2	14	Right-handed alpha
Helix 87	AJ6	G	24	35	Right-handed alpha
Helix 88	AJ7	G	42	50	Right-handed alpha
Helix 89	AJ8	G	59	72	Right-handed alpha
Helix 90	AJ9	G	88	102	Right-handed alpha
Helix 91	AK1	G	128	141	Right-handed alpha
Helix 92	AK2	G	155	175	Right-handed alpha
Helix 93	AK3	G	186	188	Right-handed 310
Helix 94	AK4	G	189	198	Right-handed alpha
Helix 95	AK5	G	215	222	Right-handed alpha
Helix 96	AK6	G	231	252	Right-handed alpha
Helix 97	AK7	G	254	261	Right-handed 310
Helix 98	AK8	G	263	272	Right-handed alpha
Helix 99	AK9	G	273	284	Right-handed alpha
Helix 100	AL1	H	2	14	Right-handed alpha
Helix 101	AL2	H	24	35	Right-handed alpha
Helix 102	AL3	H	42	50	Right-handed alpha
Helix 103	AL4	H	59	72	Right-handed alpha
Helix 104	AL5	H	88	102	Right-handed alpha
Helix 105	AL6	H	128	141	Right-handed alpha
Helix 106	AL7	H	155	175	Right-handed alpha
Helix 107	AL8	H	186	188	Right-handed 310
Helix 108	AL9	H	189	198	Right-handed alpha
Helix 109	AM1	H	215	222	Right-handed alpha
Helix 110	AM2	H	231	252	Right-handed alpha
Helix 111	AM3	H	254	261	Right-handed 310
Helix 112	AM4	H	263	272	Right-handed alpha
Helix 113	AM5	H	272	285	Right-handed alpha
Helix 114	AM6	I	2	14	Right-handed alpha
Helix 115	AM7	I	24	35	Right-handed alpha
Helix 116	AM8	I	42	50	Right-handed alpha
Helix 117	AM9	I	59	72	Right-handed alpha
Helix 118	AN1	I	88	102	Right-handed alpha
Helix 119	AN2	I	128	141	Right-handed alpha
Helix 120	AN3	I	155	175	Right-handed alpha
Helix 121	AN4	I	186	188	Right-handed 310
Helix 122	AN5	I	189	198	Right-handed alpha
Helix 123	AN6	I	215	222	Right-handed alpha
Helix 124	AN7	I	231	252	Right-handed alpha
Helix 125	AN8	I	254	261	Right-handed 310
Helix 126	AN9	I	263	272	Right-handed alpha
Helix 127	AO1	I	272	285	Right-handed alpha
Helix 128	AO2	J	2	14	Right-handed alpha
Helix 129	AO3	J	24	35	Right-handed alpha
Helix 130	AO4	J	42	50	Right-handed alpha
Helix 131	AO5	J	59	72	Right-handed alpha
Helix 132	AO6	J	88	102	Right-handed alpha
Helix 133	AO7	J	128	141	Right-handed alpha
Helix 134	AO8	J	155	175	Right-handed alpha
Helix 135	AO9	J	186	188	Right-handed 310
Helix 136	AP1	J	189	198	Right-handed alpha
Helix 137	AP2	J	215	222	Right-handed alpha
Helix 138	AP3	J	231	252	Right-handed alpha
Helix 139	AP4	J	254	261	Right-handed 310
Helix 140	AP5	J	263	272	Right-handed alpha
Helix 141	AP6	J	272	285	Right-handed alpha
Helix 142	AP7	K	2	14	Right-handed alpha
Helix 143	AP8	K	24	35	Right-handed alpha
Helix 144	AP9	K	42	50	Right-handed alpha
Helix 145	AQ1	K	59	72	Right-handed alpha
Helix 146	AQ2	K	88	102	Right-handed alpha
Helix 147	AQ3	K	128	141	Right-handed alpha
Helix 148	AQ4	K	155	175	Right-handed alpha
Helix 149	AQ5	K	186	188	Right-handed 310
Helix 150	AQ6	K	189	198	Right-handed alpha
Helix 151	AQ7	K	215	222	Right-handed alpha
Helix 152	AQ8	K	231	252	Right-handed alpha
Helix 153	AQ9	K	254	261	Right-handed 310
Helix 154	AR1	K	263	272	Right-handed alpha
Helix 155	AR2	K	272	285	Right-handed alpha
Helix 156	AR3	L	2	14	Right-handed alpha
Helix 157	AR4	L	24	35	Right-handed alpha
Helix 158	AR5	L	42	50	Right-handed alpha
Helix 159	AR6	L	59	72	Right-handed alpha
Helix 160	AR7	L	88	102	Right-handed alpha
Helix 161	AR8	L	128	141	Right-handed alpha
Helix 162	AR9	L	155	175	Right-handed alpha
Helix 163	AS1	L	186	188	Right-handed 310
Helix 164	AS2	L	189	198	Right-handed alpha
Helix 165	AS3	L	215	222	Right-handed alpha
Helix 166	AS4	L	231	252	Right-handed alpha
Helix 167	AS5	L	254	261	Right-handed 310
Helix 168	AS6	L	263	272	Right-handed alpha
Helix 169	AS7	L	272	285	Right-handed alpha

There are 12 sheets in PDB entry 9HHY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	21	first strand
Strand 2	A	39	41	parallel
Strand 3	A	78	81	parallel
Strand 4	A	106	110	parallel
Strand 5	A	148	153	parallel
Strand 6	A	178	181	parallel
Strand 7	A	201	204	parallel
Strand 8	A	226	229	parallel
Strand 9	A	17	21	parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	21	first strand
Strand 2	B	38	41	parallel
Strand 3	B	78	81	parallel
Strand 4	B	106	110	parallel
Strand 5	B	148	153	parallel
Strand 6	B	178	181	parallel
Strand 7	B	201	204	parallel
Strand 8	B	226	229	parallel
Strand 9	B	17	21	parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	17	21	first strand
Strand 2	C	38	41	parallel
Strand 3	C	78	81	parallel
Strand 4	C	106	110	parallel
Strand 5	C	148	153	parallel
Strand 6	C	178	181	parallel
Strand 7	C	201	204	parallel
Strand 8	C	226	229	parallel
Strand 9	C	17	21	parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	17	21	first strand
Strand 2	D	38	41	parallel
Strand 3	D	78	81	parallel
Strand 4	D	106	110	parallel
Strand 5	D	148	153	parallel
Strand 6	D	178	181	parallel
Strand 7	D	201	204	parallel
Strand 8	D	226	229	parallel
Strand 9	D	17	21	parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	17	21	first strand
Strand 2	E	38	41	parallel
Strand 3	E	78	81	parallel
Strand 4	E	106	110	parallel
Strand 5	E	148	153	parallel
Strand 6	E	178	181	parallel
Strand 7	E	201	204	parallel
Strand 8	E	226	229	parallel
Strand 9	E	17	21	parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	17	21	first strand
Strand 2	F	38	41	parallel
Strand 3	F	78	81	parallel
Strand 4	F	106	110	parallel
Strand 5	F	148	153	parallel
Strand 6	F	178	181	parallel
Strand 7	F	201	204	parallel
Strand 8	F	226	229	parallel
Strand 9	F	17	21	parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	17	21	first strand
Strand 2	G	39	41	parallel
Strand 3	G	78	81	parallel
Strand 4	G	106	110	parallel
Strand 5	G	148	153	parallel
Strand 6	G	178	181	parallel
Strand 7	G	201	204	parallel
Strand 8	G	226	229	parallel
Strand 9	G	17	21	parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	17	21	first strand
Strand 2	H	38	41	parallel
Strand 3	H	78	81	parallel
Strand 4	H	106	110	parallel
Strand 5	H	148	153	parallel
Strand 6	H	178	181	parallel
Strand 7	H	201	204	parallel
Strand 8	H	226	229	parallel
Strand 9	H	17	21	parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	17	21	first strand
Strand 2	I	39	41	parallel
Strand 3	I	78	81	parallel
Strand 4	I	106	110	parallel
Strand 5	I	148	153	parallel
Strand 6	I	178	181	parallel
Strand 7	I	201	204	parallel
Strand 8	I	226	229	parallel
Strand 9	I	17	21	parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	17	21	first strand
Strand 2	J	38	41	parallel
Strand 3	J	78	81	parallel
Strand 4	J	106	110	parallel
Strand 5	J	148	153	parallel
Strand 6	J	178	181	parallel
Strand 7	J	201	204	parallel
Strand 8	J	226	229	parallel
Strand 9	J	17	21	parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	17	21	first strand
Strand 2	K	38	41	parallel
Strand 3	K	78	81	parallel
Strand 4	K	106	110	parallel
Strand 5	K	148	153	parallel
Strand 6	K	178	181	parallel
Strand 7	K	201	204	parallel
Strand 8	K	226	229	parallel
Strand 9	K	17	21	parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	17	21	first strand
Strand 2	L	38	41	parallel
Strand 3	L	78	81	parallel
Strand 4	L	106	110	parallel
Strand 5	L	148	153	parallel
Strand 6	L	178	181	parallel
Strand 7	L	201	204	parallel
Strand 8	L	226	229	parallel
Strand 9	L	17	21	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9HHY

Analysis of interatomic Contacts of Structural Units in PDB entry:
9HHY